Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43Q96BQ3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM43Q96BQ3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 DUSP5P2-201ENST00000426873 1033 ntBASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TRIM43Q96BQ3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 AL353803.4-201ENST00000565882 1934 ntBASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM43Q96BQ3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM43Q96BQ3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.83■■□□□ 1.4
TRIM43Q96BQ3 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TRIM43Q96BQ3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRIM43Q96BQ3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 GCSHP5-201ENST00000443090 522 ntBASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 AC068338.2-201ENST00000563278 1430 ntBASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIM43Q96BQ3 MKRN4P-201ENST00000444706 1521 ntBASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 RARRES2P4-201ENST00000514074 484 ntBASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 AP006294.2-201ENST00000641667 209 ntBASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRIM43Q96BQ3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 AC055733.4-201ENST00000638462 1354 ntBASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 AL596275.1-201ENST00000423464 877 ntBASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 CYP2T1P-201ENST00000432607 1285 ntBASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 AC010141.2-201ENST00000452426 721 ntBASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIM43Q96BQ3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 KRT18P20-201ENST00000548986 1279 ntBASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 AC013268.1-206ENST00000638368 961 ntBASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 AC112229.1-201ENST00000639295 961 ntBASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIM43Q96BQ3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 DUSP8P3-201ENST00000399571 1760 ntBASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIM43Q96BQ3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms