Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 AC012676.1-201ENST00000574705 1949 ntBASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC01555Q8NAE3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC01555Q8NAE3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 AC027612.3-201ENST00000413684 1047 ntBASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 OR7E47P-201ENST00000546390 1422 ntBASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.92■□□□□ 0.94
LINC01555Q8NAE3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 GUSBP5-202ENST00000510805 1989 ntBASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC01555Q8NAE3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 MIR935-201ENST00000401179 91 ntBASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.9■□□□□ 0.94
LINC01555Q8NAE3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC01555Q8NAE3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC01555Q8NAE3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 AC026271.2-201ENST00000428091 497 ntBASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 RARRES2P6-201ENST00000567333 442 ntBASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 BX005040.4-201ENST00000637145 1518 ntBASIC20.88■□□□□ 0.93
LINC01555Q8NAE3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01555Q8NAE3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms