Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
CCDC71LQ8N9Z2 AC005703.6-201ENST00000623265 1329 ntBASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 DUX4L4-201ENST00000566884 1269 ntBASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC71LQ8N9Z2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 CA15P2-201ENST00000611168 834 ntBASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC71LQ8N9Z2 AC005229.4-201ENST00000610085 2198 ntBASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC71LQ8N9Z2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC71LQ8N9Z2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC71LQ8N9Z2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 SLC25A24-204ENST00000569674 2357 ntBASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC71LQ8N9Z2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC71LQ8N9Z2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms