Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 PDR17YNL264C 1053 nt5.6□□□□□ -1.51
TY1A-MR1Q04215 YCL021W-AYCL021W-A 378 nt5.6□□□□□ -1.51
TY1A-MR1Q04215 LDB19YOR322C 2457 nt5.6□□□□□ -1.51
TY1A-MR1Q04215 STB5YHR178W 2232 nt5.6□□□□□ -1.51
TY1A-MR1Q04215 TEL2YGR099W 2067 nt5.6□□□□□ -1.51
TY1A-MR1Q04215 RAD28YDR030C 1521 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 TFB2YPL122C 1542 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 CLB2YPR119W 1476 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YKL075CYKL075C 1353 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YDL085C-AYDL085C-A 207 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 NHP2YDL208W 471 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YRB1YDR002W 606 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 RSM24YDR175C 960 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YDR396WYDR396W 501 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YHL002C-AYHL002C-A 489 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 LYS1YIR034C 1122 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 ASF1YJL115W 840 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YKT6YKL196C 603 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YLR126CYLR126C 756 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 TPM1YNL079C 600 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 RUF23RUF23 254 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 MSN1YOL116W 1149 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 CKA2YOR061W 1020 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YPR076WYPR076W 375 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 DSE1YER124C 1722 nt5.59□□□□□ -1.51
TY1A-MR1Q04215 YHL017WYHL017W 1599 nt5.59□□□□□ -1.52
TY1A-MR1Q04215 TRE2YOR256C 2430 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 YGR054WYGR054W 1929 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 GUF1YLR289W 1938 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 THI22YPR121W 1719 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 AGX1YFL030W 1158 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 THI4YGR144W 981 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 PRP45YAL032C 1140 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 RPS0BYLR048W 759 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 SEC17YBL050W 879 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 YMR310CYMR310C 954 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 YOR170WYOR170W 306 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 ADF1YCL058W-A 342 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 NMD3YHR170W 1557 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 AFR1YDR085C 1863 nt5.58□□□□□ -1.52
TY1A-MR1Q04215 NGG1YDR176W 2109 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 PPN1YDR452W 2025 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YDL163WYDL163W 303 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YDL187CYDL187C 330 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 FMN1YDR236C 657 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 NCB2YDR397C 441 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 PDX1YGR193C 1233 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YHR213W-BYHR213W-B 300 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YIR042CYIR042C 711 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YJL175WYJL175W 513 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YAR064WYAR064W 300 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 COQ5YML110C 924 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 MOH1YBL049W 417 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YMR304C-AYMR304C-A 351 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YMR315WYMR315W 1050 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YNR034W-AYNR034W-A 297 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 MSA1YOR066W 1890 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 MKK1YOR231W 1527 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 XKS1YGR194C 1803 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 ACS1YAL054C 2142 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YKR078WYKR078W 1758 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 PRY3YJL078C 2646 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 YOL036WYOL036W 2286 nt5.57□□□□□ -1.52
TY1A-MR1Q04215 ENP2YGR145W 2124 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 SDS23YGL056C 1584 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 MUD2YKL074C 1584 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YDR413CYDR413C 576 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YEL075W-AYEL075W-A 612 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YIR036W-AYIR036W-A 402 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YKL102CYKL102C 306 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 SEC13YLR208W 894 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YOL046CYOL046C 675 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YPR123CYPR123C 435 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 YBR178WYBR178W 375 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 PKP2YGL059W 1476 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 NAM9YNL137C 1461 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 XBP1YIL101C 1944 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 ARE2YNR019W 1929 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 PTC3YBL056W 1407 nt5.56□□□□□ -1.52
TY1A-MR1Q04215 SWT1YOR166C 1377 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 THR4YCR053W 1545 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 KEL1YHR158C 3495 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 BUD27YFL023W 2391 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 HRQ1YDR291W 3234 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 YHI9YHR029C 885 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 EFM4YIL064W 774 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 YJR079WYJR079W 330 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 MDH1YKL085W 1005 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 MEH1YKR007W 555 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 ZRT2YLR130C 1269 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 RNH203YLR154C 333 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 OCA2YNL056W 594 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 YGK3YOL128C 1128 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 RPS28AYOR167C 204 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 YPL035CYPL035C 348 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 HRP1YOL123W 1605 nt5.55□□□□□ -1.52
TY1A-MR1Q04215 PXL1YKR090W 2121 nt5.54□□□□□ -1.52
TY1A-MR1Q04215 ESC8YOL017W 2145 nt5.54□□□□□ -1.52
TY1A-MR1Q04215 AFG1YEL052W 1530 nt5.54□□□□□ -1.52
TY1A-MR1Q04215 PDR18YNR070W 4002 nt5.54□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 64.5 ms