Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC142086.2-201ENST00000569753 217 ntBASIC27.72■■■□□ 2.03
COL15A1P39059 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.72■■■□□ 2.03
COL15A1P39059 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.71■■■□□ 2.03
COL15A1P39059 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
COL15A1P39059 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.71■■■□□ 2.03
COL15A1P39059 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 DUSP8P3-201ENST00000399571 1760 ntBASIC27.71■■■□□ 2.03
COL15A1P39059 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.71■■■□□ 2.03
COL15A1P39059 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.71■■■□□ 2.03
COL15A1P39059 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.71■■■□□ 2.03
COL15A1P39059 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC27.71■■■□□ 2.03
COL15A1P39059 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
COL15A1P39059 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
COL15A1P39059 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.7■■■□□ 2.03
COL15A1P39059 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.7■■■□□ 2.02
COL15A1P39059 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC27.7■■■□□ 2.02
COL15A1P39059 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.02
COL15A1P39059 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.7■■■□□ 2.02
COL15A1P39059 UBE2DNL-204ENST00000602536 740 ntBASIC27.7■■■□□ 2.02
COL15A1P39059 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
COL15A1P39059 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
COL15A1P39059 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.69■■■□□ 2.02
COL15A1P39059 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.69■■■□□ 2.02
COL15A1P39059 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 GUSBP6-202ENST00000438529 1198 ntBASIC27.69■■■□□ 2.02
COL15A1P39059 APTR-205ENST00000447009 902 ntTSL 2 BASIC27.69■■■□□ 2.02
COL15A1P39059 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
COL15A1P39059 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.69■■■□□ 2.02
COL15A1P39059 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL15A1P39059 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.68■■■□□ 2.02
COL15A1P39059 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL15A1P39059 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
COL15A1P39059 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
COL15A1P39059 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.68■■■□□ 2.02
COL15A1P39059 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 DUX4L16-201ENST00000555130 1264 ntBASIC27.67■■■□□ 2.02
COL15A1P39059 AL121832.2-201ENST00000610979 668 ntBASIC27.67■■■□□ 2.02
COL15A1P39059 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.67■■■□□ 2.02
COL15A1P39059 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
COL15A1P39059 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL15A1P39059 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL15A1P39059 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.66■■■□□ 2.02
COL15A1P39059 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL15A1P39059 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL15A1P39059 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
COL15A1P39059 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
COL15A1P39059 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
COL15A1P39059 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
COL15A1P39059 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.65■■■□□ 2.02
COL15A1P39059 AC009237.3-201ENST00000393279 1427 ntBASIC27.65■■■□□ 2.02
COL15A1P39059 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.65■■■□□ 2.02
COL15A1P39059 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.65■■■□□ 2.02
COL15A1P39059 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL15A1P39059 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.65■■■□□ 2.02
COL15A1P39059 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL15A1P39059 SLC7A5P2-201ENST00000553010 536 ntBASIC27.65■■■□□ 2.02
COL15A1P39059 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.65■■■□□ 2.02
COL15A1P39059 AC231657.2-201ENST00000624556 255 ntBASIC27.65■■■□□ 2.02
COL15A1P39059 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.65■■■□□ 2.02
COL15A1P39059 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC27.65■■■□□ 2.02
COL15A1P39059 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
COL15A1P39059 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
COL15A1P39059 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC27.64■■■□□ 2.02
COL15A1P39059 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.64■■■□□ 2.02
COL15A1P39059 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.64■■■□□ 2.02
COL15A1P39059 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.64■■■□□ 2.02
COL15A1P39059 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.64■■■□□ 2.02
COL15A1P39059 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.02
COL15A1P39059 TSPY6P-201ENST00000448518 926 ntBASIC27.64■■■□□ 2.02
COL15A1P39059 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.64■■■□□ 2.02
COL15A1P39059 CD99P1-205ENST00000527459 561 ntBASIC27.64■■■□□ 2.02
COL15A1P39059 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.64■■■□□ 2.02
COL15A1P39059 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.64■■■□□ 2.02
COL15A1P39059 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC27.64■■■□□ 2.02
COL15A1P39059 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.64■■■□□ 2.02
COL15A1P39059 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.64■■■□□ 2.02
COL15A1P39059 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
COL15A1P39059 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.64■■■□□ 2.01
COL15A1P39059 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
COL15A1P39059 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC27.64■■■□□ 2.01
COL15A1P39059 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.64■■■□□ 2.01
COL15A1P39059 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms