Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 NOP16YER002W 696 nt5.41□□□□□ -1.54
MSH3P25336 FRA2YGL220W 363 nt5.41□□□□□ -1.54
MSH3P25336 YGR122WYGR122W 1209 nt5.41□□□□□ -1.54
MSH3P25336 TRX2YGR209C 315 nt5.41□□□□□ -1.54
MSH3P25336 YGR290WYGR290W 444 nt5.41□□□□□ -1.54
MSH3P25336 YHR193C-AYHR193C-A 375 nt5.41□□□□□ -1.54
MSH3P25336 PET130YJL023C 1044 nt5.41□□□□□ -1.54
MSH3P25336 TRS33YOR115C 807 nt5.41□□□□□ -1.54
MSH3P25336 TIF4632YGL049C 2745 nt5.41□□□□□ -1.54
MSH3P25336 IOC4YMR044W 1428 nt5.4□□□□□ -1.54
MSH3P25336 YJR015WYJR015W 1533 nt5.4□□□□□ -1.54
MSH3P25336 NUS1YDL193W 1128 nt5.4□□□□□ -1.54
MSH3P25336 SLU7YDR088C 1149 nt5.4□□□□□ -1.54
MSH3P25336 YHL009W-AYHL009W-A 1242 nt5.4□□□□□ -1.54
MSH3P25336 GPX1YKL026C 504 nt5.4□□□□□ -1.54
MSH3P25336 YHC1YLR298C 696 nt5.4□□□□□ -1.54
MSH3P25336 SEN15YMR059W 387 nt5.4□□□□□ -1.54
MSH3P25336 YNL035CYNL035C 1170 nt5.4□□□□□ -1.54
MSH3P25336 YOL029CYOL029C 606 nt5.4□□□□□ -1.54
MSH3P25336 PRP28YDR243C 1767 nt5.39□□□□□ -1.55
MSH3P25336 ARN1YHL040C 1884 nt5.39□□□□□ -1.55
MSH3P25336 HMO1YDR174W 741 nt5.39□□□□□ -1.55
MSH3P25336 RPN12YFR052W 825 nt5.39□□□□□ -1.55
MSH3P25336 YGR035W-AYGR035W-A 222 nt5.39□□□□□ -1.55
MSH3P25336 YIL030W-AYIL030W-A 339 nt5.39□□□□□ -1.55
MSH3P25336 YSF3YNL138W-A 258 nt5.39□□□□□ -1.55
MSH3P25336 PEP4YPL154C 1218 nt5.39□□□□□ -1.55
MSH3P25336 YBR096WYBR096W 693 nt5.39□□□□□ -1.55
MSH3P25336 STP22YCL008C 1158 nt5.39□□□□□ -1.55
MSH3P25336 MNT2YGL257C 1677 nt5.39□□□□□ -1.55
MSH3P25336 RGL1YPL066W 1440 nt5.39□□□□□ -1.55
MSH3P25336 PHO5YBR093C 1404 nt5.39□□□□□ -1.55
MSH3P25336 GCN20YFR009W 2259 nt5.39□□□□□ -1.55
MSH3P25336 NOP8YOL144W 1455 nt5.39□□□□□ -1.55
MSH3P25336 GUK1YDR454C 564 nt5.38□□□□□ -1.55
MSH3P25336 UBC8YEL012W 657 nt5.38□□□□□ -1.55
MSH3P25336 MXR1YER042W 555 nt5.38□□□□□ -1.55
MSH3P25336 YER158W-AYER158W-A 216 nt5.38□□□□□ -1.55
MSH3P25336 FAU1YER183C 636 nt5.38□□□□□ -1.55
MSH3P25336 YGL193CYGL193C 312 nt5.38□□□□□ -1.55
MSH3P25336 YHL049CYHL049C 816 nt5.38□□□□□ -1.55
MSH3P25336 GON7YJL184W 372 nt5.38□□□□□ -1.55
MSH3P25336 CSR1YLR380W 1227 nt5.38□□□□□ -1.55
MSH3P25336 IRC21YMR073C 606 nt5.38□□□□□ -1.55
MSH3P25336 GIM3YNL153C 390 nt5.38□□□□□ -1.55
MSH3P25336 YNL324WYNL324W 396 nt5.38□□□□□ -1.55
MSH3P25336 RRG8YPR116W 834 nt5.38□□□□□ -1.55
MSH3P25336 SST2YLR452C 2097 nt5.38□□□□□ -1.55
MSH3P25336 ALG11YNL048W 1647 nt5.37□□□□□ -1.55
MSH3P25336 HAP4YKL109W 1665 nt5.37□□□□□ -1.55
MSH3P25336 CRT10YOL063C 2874 nt5.37□□□□□ -1.55
MSH3P25336 LRS4YDR439W 1044 nt5.37□□□□□ -1.55
MSH3P25336 MIC26YGR235C 702 nt5.37□□□□□ -1.55
MSH3P25336 CAB4YGR277C 918 nt5.37□□□□□ -1.55
MSH3P25336 YHR180WYHR180W 492 nt5.37□□□□□ -1.55
MSH3P25336 THI11YJR156C 1023 nt5.37□□□□□ -1.55
MSH3P25336 ECI1YLR284C 843 nt5.37□□□□□ -1.55
MSH3P25336 ELO3YLR372W 1038 nt5.37□□□□□ -1.55
MSH3P25336 YNR071CYNR071C 1029 nt5.37□□□□□ -1.55
MSH3P25336 FAR10YLR238W 1437 nt5.37□□□□□ -1.55
MSH3P25336 GAT2YMR136W 1683 nt5.37□□□□□ -1.55
MSH3P25336 TSL1YML100W 3297 nt5.36□□□□□ -1.55
MSH3P25336 YMR102CYMR102C 2505 nt5.36□□□□□ -1.55
MSH3P25336 RSM18YER050C 417 nt5.36□□□□□ -1.55
MSH3P25336 YER084W-AYER084W-A 513 nt5.36□□□□□ -1.55
MSH3P25336 MND1YGL183C 660 nt5.36□□□□□ -1.55
MSH3P25336 RRF1YHR038W 693 nt5.36□□□□□ -1.55
MSH3P25336 RPF1YHR088W 888 nt5.36□□□□□ -1.55
MSH3P25336 YJL114WYJL114W 681 nt5.36□□□□□ -1.55
MSH3P25336 IRC9YJL142C 393 nt5.36□□□□□ -1.55
MSH3P25336 YKL131WYKL131W 522 nt5.36□□□□□ -1.55
MSH3P25336 TOA1YOR194C 861 nt5.36□□□□□ -1.55
MSH3P25336 MFM1YPL060W 1242 nt5.36□□□□□ -1.55
MSH3P25336 HSP26YBR072W 645 nt5.36□□□□□ -1.55
MSH3P25336 MMT2YPL224C 1455 nt5.36□□□□□ -1.55
MSH3P25336 CDC37YDR168W 1521 nt5.36□□□□□ -1.55
MSH3P25336 APN2YBL019W 1563 nt5.36□□□□□ -1.55
MSH3P25336 CET1YPL228W 1650 nt5.36□□□□□ -1.55
MSH3P25336 DSE1YER124C 1722 nt5.36□□□□□ -1.55
MSH3P25336 HSP82YPL240C 2130 nt5.36□□□□□ -1.55
MSH3P25336 MCM4YPR019W 2802 nt5.36□□□□□ -1.55
MSH3P25336 ABF1YKL112W 2196 nt5.35□□□□□ -1.55
MSH3P25336 THI20YOL055C 1656 nt5.35□□□□□ -1.55
MSH3P25336 UGA2YBR006W 1494 nt5.35□□□□□ -1.55
MSH3P25336 snR84snR84 550 nt5.35□□□□□ -1.55
MSH3P25336 CNN1YFR046C 1086 nt5.35□□□□□ -1.55
MSH3P25336 GAT4YIR013C 366 nt5.35□□□□□ -1.55
MSH3P25336 PAN1YIR006C 4443 nt5.35□□□□□ -1.55
MSH3P25336 GDE1YPL110C 3672 nt5.35□□□□□ -1.55
MSH3P25336 NDC1YML031W 1968 nt5.35□□□□□ -1.55
MSH3P25336 HPC2YBR215W 1878 nt5.34□□□□□ -1.55
MSH3P25336 YEL067CYEL067C 588 nt5.34□□□□□ -1.55
MSH3P25336 CDC12YHR107C 1224 nt5.34□□□□□ -1.55
MSH3P25336 YAL034C-BYAL034C-B 354 nt5.34□□□□□ -1.55
MSH3P25336 YKL023WYKL023W 834 nt5.34□□□□□ -1.55
MSH3P25336 ERG3YLR056W 1098 nt5.34□□□□□ -1.55
MSH3P25336 ATP14YLR295C 375 nt5.34□□□□□ -1.55
MSH3P25336 MDG1YNL173C 1101 nt5.34□□□□□ -1.55
MSH3P25336 BRX1YOL077C 876 nt5.34□□□□□ -1.55
MSH3P25336 TRM10YOL093W 882 nt5.34□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 69.4 ms