Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
UPK1BO75841 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UPK1BO75841 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
UPK1BO75841 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.93■□□□□ 0.62
UPK1BO75841 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
UPK1BO75841 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.93■□□□□ 0.62
UPK1BO75841 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.93■□□□□ 0.62
UPK1BO75841 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
UPK1BO75841 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1BO75841 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.92■□□□□ 0.62
UPK1BO75841 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.92■□□□□ 0.62
UPK1BO75841 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1BO75841 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.92■□□□□ 0.62
UPK1BO75841 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.92■□□□□ 0.62
UPK1BO75841 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1BO75841 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
UPK1BO75841 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
UPK1BO75841 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.92■□□□□ 0.62
UPK1BO75841 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1BO75841 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.91■□□□□ 0.62
UPK1BO75841 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
UPK1BO75841 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
UPK1BO75841 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC18.91■□□□□ 0.62
UPK1BO75841 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.91■□□□□ 0.62
UPK1BO75841 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
UPK1BO75841 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
UPK1BO75841 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
UPK1BO75841 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
UPK1BO75841 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.9■□□□□ 0.62
UPK1BO75841 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
UPK1BO75841 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
UPK1BO75841 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
UPK1BO75841 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
UPK1BO75841 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
UPK1BO75841 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
UPK1BO75841 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
UPK1BO75841 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 DUX4L29-201ENST00000425409 679 ntBASIC18.89■□□□□ 0.61
UPK1BO75841 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1BO75841 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UPK1BO75841 AC087741.3-201ENST00000624270 1347 ntBASIC18.89■□□□□ 0.61
UPK1BO75841 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
UPK1BO75841 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
UPK1BO75841 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.89■□□□□ 0.61
UPK1BO75841 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.89■□□□□ 0.61
UPK1BO75841 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.89■□□□□ 0.61
UPK1BO75841 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
UPK1BO75841 GABARAPL3-202ENST00000624044 1851 ntBASIC18.88■□□□□ 0.61
UPK1BO75841 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1BO75841 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1BO75841 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.88■□□□□ 0.61
UPK1BO75841 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UPK1BO75841 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.88■□□□□ 0.61
UPK1BO75841 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
UPK1BO75841 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UPK1BO75841 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms