Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AC080038.3-201ENST00000623346 1952 ntBASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 AC133561.1-201ENST00000568600 2415 ntBASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN16Q9Y5I7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN16Q9Y5I7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 AC105233.4-201ENST00000642045 216 ntBASIC20.33■□□□□ 0.85
CLDN16Q9Y5I7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CLDN16Q9Y5I7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN16Q9Y5I7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN16Q9Y5I7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN16Q9Y5I7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 AC139530.1-201ENST00000575312 1977 ntBASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 AL358852.1-201ENST00000623174 1268 ntBASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN16Q9Y5I7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 AL354811.1-201ENST00000610286 706 ntBASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 MIR6084-201ENST00000622012 110 ntBASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN16Q9Y5I7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 AC026271.2-201ENST00000428091 497 ntBASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLDN16Q9Y5I7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 AC027612.3-201ENST00000413684 1047 ntBASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 AC012676.1-201ENST00000574705 1949 ntBASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 AC233723.2-201ENST00000623798 2106 ntBASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLDN16Q9Y5I7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
CLDN16Q9Y5I7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN16Q9Y5I7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms