Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 SUDS3P1-201ENST00000505831 966 ntBASIC18.97■□□□□ 0.63
CDH20Q9HBT6 AP005435.1-201ENST00000529293 1178 ntBASIC18.97■□□□□ 0.63
CDH20Q9HBT6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDH20Q9HBT6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH20Q9HBT6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH20Q9HBT6 CA15P2-201ENST00000611168 834 ntBASIC18.96■□□□□ 0.63
CDH20Q9HBT6 AL136967.2-201ENST00000623968 743 ntBASIC18.96■□□□□ 0.63
CDH20Q9HBT6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH20Q9HBT6 AL031602.1-201ENST00000633169 911 ntBASIC18.96■□□□□ 0.63
CDH20Q9HBT6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH20Q9HBT6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH20Q9HBT6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 AC010141.3-201ENST00000456659 717 ntBASIC18.94■□□□□ 0.62
CDH20Q9HBT6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDH20Q9HBT6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 C1orf229-201ENST00000623686 2258 ntBASIC18.93■□□□□ 0.62
CDH20Q9HBT6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 ESRRAP2-201ENST00000418437 1549 ntBASIC18.93■□□□□ 0.62
CDH20Q9HBT6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH20Q9HBT6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 IGHV3-19-201ENST00000521488 291 ntBASIC18.92■□□□□ 0.62
CDH20Q9HBT6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDH20Q9HBT6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 TSPY26P-201ENST00000476365 1326 ntBASIC18.91■□□□□ 0.62
CDH20Q9HBT6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.91■□□□□ 0.62
CDH20Q9HBT6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CDH20Q9HBT6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms