Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD4Q9H0A8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 FAM99A-202ENST00000538190 1989 ntBASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 AL031848.2-201ENST00000607670 837 ntBASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD4Q9H0A8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 AC010542.4-201ENST00000563151 1910 ntBASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COMMD4Q9H0A8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.14■□□□□ 0.66
COMMD4Q9H0A8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COMMD4Q9H0A8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD4Q9H0A8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 BX664725.1-201ENST00000438252 379 ntBASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 AC004687.1-201ENST00000579003 1625 ntBASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD4Q9H0A8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 AC021242.3-201ENST00000607598 1377 ntBASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 AC026310.3-201ENST00000625186 2373 ntBASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
COMMD4Q9H0A8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD4Q9H0A8 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.1■□□□□ 0.65
COMMD4Q9H0A8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.09■□□□□ 0.65
COMMD4Q9H0A8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD4Q9H0A8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 251.5 ms