Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 AC004987.1-201ENST00000428627 508 ntBASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SCRT1Q9BWW7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 AC120024.1-201ENST00000562672 995 ntBASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SCRT1Q9BWW7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 LINC01006-201ENST00000333319 2292 ntBASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 BHLHE23-202ENST00000612929 1109 ntBASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.36■□□□□ 0.37
SCRT1Q9BWW7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCRT1Q9BWW7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 ATP5G2P3-201ENST00000429083 425 ntBASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCRT1Q9BWW7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 FEM1AP4-201ENST00000443167 1987 ntBASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SCRT1Q9BWW7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCRT1Q9BWW7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms