Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDUFA1O15239 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
NDUFA1O15239 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
NDUFA1O15239 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFA1O15239 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFA1O15239 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.89□□□□□ -0.03
NDUFA1O15239 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NDUFA1O15239 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.89□□□□□ -0.03
NDUFA1O15239 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDUFA1O15239 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFA1O15239 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NDUFA1O15239 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 TSPY13P-201ENST00000338964 914 ntBASIC14.88□□□□□ -0.03
NDUFA1O15239 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFA1O15239 AC004987.1-201ENST00000428627 508 ntBASIC14.88□□□□□ -0.03
NDUFA1O15239 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.88□□□□□ -0.03
NDUFA1O15239 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.88□□□□□ -0.03
NDUFA1O15239 MIR4281-201ENST00000580852 62 ntBASIC14.88□□□□□ -0.03
NDUFA1O15239 LSM7-203ENST00000585409 512 ntTSL 2 BASIC14.88□□□□□ -0.03
NDUFA1O15239 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NDUFA1O15239 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NDUFA1O15239 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDUFA1O15239 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFA1O15239 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFA1O15239 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NDUFA1O15239 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFA1O15239 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFA1O15239 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFA1O15239 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC14.87□□□□□ -0.03
NDUFA1O15239 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC14.87□□□□□ -0.03
NDUFA1O15239 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NDUFA1O15239 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.86□□□□□ -0.03
NDUFA1O15239 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC14.86□□□□□ -0.03
NDUFA1O15239 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.86□□□□□ -0.03
NDUFA1O15239 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC14.86□□□□□ -0.03
NDUFA1O15239 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.86□□□□□ -0.03
NDUFA1O15239 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NDUFA1O15239 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.86□□□□□ -0.03
NDUFA1O15239 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.86□□□□□ -0.03
NDUFA1O15239 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC14.85□□□□□ -0.03
NDUFA1O15239 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 AC010980.1-201ENST00000587192 1142 ntBASIC14.85□□□□□ -0.03
NDUFA1O15239 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
NDUFA1O15239 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 AC005229.4-201ENST00000610085 2198 ntBASIC14.85□□□□□ -0.03
NDUFA1O15239 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NDUFA1O15239 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NDUFA1O15239 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
NDUFA1O15239 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
NDUFA1O15239 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
NDUFA1O15239 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms