Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 AC010536.3-201ENST00000620306 533 ntBASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.19■■■□□ 2.58
LTBP4Q8N2S1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
LTBP4Q8N2S1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC31.18■■■□□ 2.58
LTBP4Q8N2S1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LTBP4Q8N2S1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LTBP4Q8N2S1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.18■■■□□ 2.58
LTBP4Q8N2S1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 AC073648.6-201ENST00000641589 218 ntBASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 ALDH1A3-203ENST00000557963 1670 ntBASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 AL161729.1-201ENST00000604104 1402 ntBASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
LTBP4Q8N2S1 UBE2SP1-201ENST00000450587 669 ntBASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 AL359736.2-201ENST00000621992 437 ntBASIC31.16■■■□□ 2.58
LTBP4Q8N2S1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
LTBP4Q8N2S1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LTBP4Q8N2S1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
LTBP4Q8N2S1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
LTBP4Q8N2S1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
LTBP4Q8N2S1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC31.14■■■□□ 2.58
LTBP4Q8N2S1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
LTBP4Q8N2S1 FP325331.1-202ENST00000623531 1380 ntBASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LTBP4Q8N2S1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC31.11■■■□□ 2.57
LTBP4Q8N2S1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
LTBP4Q8N2S1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC31.11■■■□□ 2.57
LTBP4Q8N2S1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
LTBP4Q8N2S1 AC068338.2-201ENST00000563278 1430 ntBASIC31.11■■■□□ 2.57
LTBP4Q8N2S1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC31.1■■■□□ 2.57
LTBP4Q8N2S1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC31.1■■■□□ 2.57
LTBP4Q8N2S1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC31.1■■■□□ 2.57
LTBP4Q8N2S1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
LTBP4Q8N2S1 AC026366.1-201ENST00000488803 879 ntBASIC31.1■■■□□ 2.57
LTBP4Q8N2S1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 AC093787.1-201ENST00000450396 207 ntBASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 REXO1L12P-201ENST00000622156 912 ntBASIC31.09■■■□□ 2.57
LTBP4Q8N2S1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 MIR718-201ENST00000390190 70 ntBASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 AC013268.1-206ENST00000638368 961 ntBASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 AC112229.1-201ENST00000639295 961 ntBASIC31.08■■■□□ 2.57
LTBP4Q8N2S1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.57
LTBP4Q8N2S1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LTBP4Q8N2S1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
LTBP4Q8N2S1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LTBP4Q8N2S1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 UNC93B5-201ENST00000530315 699 ntBASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms