Protein–RNA interactions for Protein: Q2M238

RRN3P1, Putative RRN3-like protein RRN3P1, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1Q2M238 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RRN3P1Q2M238 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RRN3P1Q2M238 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RRN3P1Q2M238 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RRN3P1Q2M238 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RRN3P1Q2M238 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RRN3P1Q2M238 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RRN3P1Q2M238 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RRN3P1Q2M238 C1orf229-201ENST00000623686 2258 ntBASIC16.27■□□□□ 0.2
RRN3P1Q2M238 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RRN3P1Q2M238 AC009102.2-201ENST00000606772 1639 ntBASIC16.27■□□□□ 0.19
RRN3P1Q2M238 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RRN3P1Q2M238 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms