Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.21■□□□□ 0.67
UPK1BO75841 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPK1BO75841 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.2■□□□□ 0.66
UPK1BO75841 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
UPK1BO75841 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.2■□□□□ 0.66
UPK1BO75841 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPK1BO75841 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
UPK1BO75841 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.2■□□□□ 0.66
UPK1BO75841 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UPK1BO75841 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UPK1BO75841 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.2■□□□□ 0.66
UPK1BO75841 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.2■□□□□ 0.66
UPK1BO75841 FEM1AP4-201ENST00000443167 1987 ntBASIC19.19■□□□□ 0.66
UPK1BO75841 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UPK1BO75841 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UPK1BO75841 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UPK1BO75841 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
UPK1BO75841 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
UPK1BO75841 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.18■□□□□ 0.66
UPK1BO75841 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.18■□□□□ 0.66
UPK1BO75841 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.18■□□□□ 0.66
UPK1BO75841 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.18■□□□□ 0.66
UPK1BO75841 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.18■□□□□ 0.66
UPK1BO75841 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.18■□□□□ 0.66
UPK1BO75841 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UPK1BO75841 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
UPK1BO75841 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
UPK1BO75841 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK1BO75841 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
UPK1BO75841 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.17■□□□□ 0.66
UPK1BO75841 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UPK1BO75841 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK1BO75841 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
UPK1BO75841 Z98882.1-201ENST00000622160 2253 ntBASIC19.17■□□□□ 0.66
UPK1BO75841 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
UPK1BO75841 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK1BO75841 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
UPK1BO75841 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
UPK1BO75841 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
UPK1BO75841 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.16■□□□□ 0.66
UPK1BO75841 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
UPK1BO75841 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.15■□□□□ 0.66
UPK1BO75841 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UPK1BO75841 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
UPK1BO75841 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
UPK1BO75841 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.15■□□□□ 0.66
UPK1BO75841 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
UPK1BO75841 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
UPK1BO75841 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
UPK1BO75841 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.14■□□□□ 0.66
UPK1BO75841 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 AC126177.7-201ENST00000547904 679 ntBASIC19.14■□□□□ 0.65
UPK1BO75841 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.14■□□□□ 0.65
UPK1BO75841 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UPK1BO75841 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.14■□□□□ 0.65
UPK1BO75841 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.14■□□□□ 0.65
UPK1BO75841 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
UPK1BO75841 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.13■□□□□ 0.65
UPK1BO75841 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.13■□□□□ 0.65
UPK1BO75841 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.13■□□□□ 0.65
UPK1BO75841 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.13■□□□□ 0.65
UPK1BO75841 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UPK1BO75841 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
UPK1BO75841 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UPK1BO75841 AL020996.1-203ENST00000536896 2307 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms