Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SETD9Q8NE22 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SETD9Q8NE22 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
SETD9Q8NE22 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.23■□□□□ 0.83
SETD9Q8NE22 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SETD9Q8NE22 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SETD9Q8NE22 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
SETD9Q8NE22 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 AC011551.1-201ENST00000614101 683 ntBASIC20.21■□□□□ 0.83
SETD9Q8NE22 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SETD9Q8NE22 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SETD9Q8NE22 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.2■□□□□ 0.82
SETD9Q8NE22 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SETD9Q8NE22 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.2■□□□□ 0.82
SETD9Q8NE22 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.2■□□□□ 0.82
SETD9Q8NE22 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SETD9Q8NE22 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SETD9Q8NE22 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.19■□□□□ 0.82
SETD9Q8NE22 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SETD9Q8NE22 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SETD9Q8NE22 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 AC087393.1-201ENST00000582896 145 ntBASIC20.18■□□□□ 0.82
SETD9Q8NE22 AC018755.3-202ENST00000596210 929 ntBASIC20.18■□□□□ 0.82
SETD9Q8NE22 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SETD9Q8NE22 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
SETD9Q8NE22 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SETD9Q8NE22 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
SETD9Q8NE22 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.17■□□□□ 0.82
SETD9Q8NE22 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SETD9Q8NE22 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SETD9Q8NE22 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SETD9Q8NE22 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms