Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.25■□□□□ 0.99
KRT78Q8N1N4 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.25■□□□□ 0.99
KRT78Q8N1N4 C1orf229-201ENST00000623686 2258 ntBASIC21.25■□□□□ 0.99
KRT78Q8N1N4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 AC006455.2-201ENST00000429931 906 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 pRNA.6-201ENST00000610482 90 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 pRNA.5-201ENST00000612139 90 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 pRNA.11-201ENST00000618423 90 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 pRNA.13-201ENST00000619112 90 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KRT78Q8N1N4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.24■□□□□ 0.99
KRT78Q8N1N4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 AC004687.1-201ENST00000579003 1625 ntBASIC21.23■□□□□ 0.99
KRT78Q8N1N4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 DUX4L19-201ENST00000557448 1267 ntBASIC21.23■□□□□ 0.99
KRT78Q8N1N4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.23■□□□□ 0.99
KRT78Q8N1N4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.23■□□□□ 0.99
KRT78Q8N1N4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT78Q8N1N4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT78Q8N1N4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 AC133637.1-201ENST00000624115 1537 ntBASIC21.2■□□□□ 0.98
KRT78Q8N1N4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 AL136116.3-201ENST00000402907 1138 ntBASIC21.2■□□□□ 0.98
KRT78Q8N1N4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
KRT78Q8N1N4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 MIR3181-201ENST00000578512 73 ntBASIC21.19■□□□□ 0.98
KRT78Q8N1N4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
KRT78Q8N1N4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms