Protein–RNA interactions for Protein: Q5JS37

NHLRC3, NHL repeat-containing protein 3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3Q5JS37 ESRRAP2-201ENST00000418437 1549 ntBASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC3Q5JS37 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
NHLRC3Q5JS37 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 AL031848.2-201ENST00000607670 837 ntBASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
NHLRC3Q5JS37 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 AL353803.4-201ENST00000565882 1934 ntBASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 MIR6722-201ENST00000617286 78 ntBASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 KRT8P33-201ENST00000508125 1423 ntBASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
NHLRC3Q5JS37 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.89■□□□□ 0.62
NHLRC3Q5JS37 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 AC021242.3-201ENST00000607598 1377 ntBASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 AC144652.1-201ENST00000609974 1624 ntBASIC18.89■□□□□ 0.61
NHLRC3Q5JS37 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NHLRC3Q5JS37 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.87■□□□□ 0.61
NHLRC3Q5JS37 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC3Q5JS37 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms