Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
USP11P51784 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP11P51784 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.05■■□□□ 1.6
USP11P51784 AC091305.1-201ENST00000479476 895 ntBASIC25.05■■□□□ 1.6
USP11P51784 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.05■■□□□ 1.6
USP11P51784 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.05■■□□□ 1.6
USP11P51784 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
USP11P51784 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
USP11P51784 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
USP11P51784 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.04■■□□□ 1.6
USP11P51784 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.04■■□□□ 1.6
USP11P51784 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.04■■□□□ 1.6
USP11P51784 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.04■■□□□ 1.6
USP11P51784 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.04■■□□□ 1.6
USP11P51784 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.04■■□□□ 1.6
USP11P51784 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP11P51784 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
USP11P51784 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.03■■□□□ 1.6
USP11P51784 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.03■■□□□ 1.6
USP11P51784 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 AC099791.1-201ENST00000416440 715 ntBASIC25.03■■□□□ 1.6
USP11P51784 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.03■■□□□ 1.6
USP11P51784 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
USP11P51784 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
USP11P51784 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.03■■□□□ 1.6
USP11P51784 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.02■■□□□ 1.6
USP11P51784 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
USP11P51784 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
USP11P51784 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP11P51784 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
USP11P51784 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC25.02■■□□□ 1.6
USP11P51784 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
USP11P51784 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.01■■□□□ 1.59
USP11P51784 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
USP11P51784 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.01■■□□□ 1.59
USP11P51784 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.01■■□□□ 1.59
USP11P51784 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.01■■□□□ 1.59
USP11P51784 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
USP11P51784 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.01■■□□□ 1.59
USP11P51784 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP11P51784 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
USP11P51784 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC25■■□□□ 1.59
USP11P51784 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
USP11P51784 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25■■□□□ 1.59
USP11P51784 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC25■■□□□ 1.59
USP11P51784 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USP11P51784 AP005435.1-201ENST00000529293 1178 ntBASIC25■■□□□ 1.59
USP11P51784 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25■■□□□ 1.59
USP11P51784 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25■■□□□ 1.59
USP11P51784 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC25■■□□□ 1.59
USP11P51784 CA15P2-201ENST00000611168 834 ntBASIC25■■□□□ 1.59
USP11P51784 AL031602.1-201ENST00000633169 911 ntBASIC25■■□□□ 1.59
USP11P51784 AC068587.7-201ENST00000641602 218 ntBASIC25■■□□□ 1.59
USP11P51784 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25■■□□□ 1.59
USP11P51784 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
USP11P51784 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
USP11P51784 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25■■□□□ 1.59
USP11P51784 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
USP11P51784 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
USP11P51784 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
USP11P51784 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
USP11P51784 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
USP11P51784 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.99■■□□□ 1.59
USP11P51784 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
USP11P51784 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
USP11P51784 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC24.99■■□□□ 1.59
USP11P51784 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
USP11P51784 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
USP11P51784 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.98■■□□□ 1.59
USP11P51784 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.98■■□□□ 1.59
USP11P51784 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
USP11P51784 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
USP11P51784 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
USP11P51784 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.97■■□□□ 1.59
USP11P51784 AC126544.1-201ENST00000580842 1059 ntBASIC24.97■■□□□ 1.59
USP11P51784 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
USP11P51784 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
USP11P51784 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.97■■□□□ 1.59
USP11P51784 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
USP11P51784 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
USP11P51784 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 593.3 ms