Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 TFB3YDR460W 966 nt5.33□□□□□ -1.56
SSM4P40318 YER034WYER034W 558 nt5.33□□□□□ -1.56
SSM4P40318 YIL152WYIL152W 708 nt5.33□□□□□ -1.56
SSM4P40318 YLR374CYLR374C 390 nt5.33□□□□□ -1.56
SSM4P40318 YIM2YMR151W 438 nt5.33□□□□□ -1.56
SSM4P40318 VPS28YPL065W 729 nt5.33□□□□□ -1.56
SSM4P40318 PRM2YIL037C 1971 nt5.33□□□□□ -1.56
SSM4P40318 PRM7YDL039C 2097 nt5.32□□□□□ -1.56
SSM4P40318 GCV1YDR019C 1203 nt5.32□□□□□ -1.56
SSM4P40318 YDR391CYDR391C 699 nt5.32□□□□□ -1.56
SSM4P40318 DUO1YGL061C 744 nt5.32□□□□□ -1.56
SSM4P40318 SGN1YIR001C 753 nt5.32□□□□□ -1.56
SSM4P40318 RDS1YCR106W 2499 nt5.32□□□□□ -1.56
SSM4P40318 GAC1YOR178C 2382 nt5.32□□□□□ -1.56
SSM4P40318 YDR444WYDR444W 2064 nt5.32□□□□□ -1.56
SSM4P40318 TCM62YBR044C 1719 nt5.31□□□□□ -1.56
SSM4P40318 YGR051CYGR051C 324 nt5.31□□□□□ -1.56
SSM4P40318 YLR346CYLR346C 306 nt5.31□□□□□ -1.56
SSM4P40318 SIR1YKR101W 1965 nt5.31□□□□□ -1.56
SSM4P40318 CNA1YLR433C 1662 nt5.31□□□□□ -1.56
SSM4P40318 YHL012WYHL012W 1482 nt5.31□□□□□ -1.56
SSM4P40318 GAS5YOL030W 1455 nt5.31□□□□□ -1.56
SSM4P40318 THI20YOL055C 1656 nt5.3□□□□□ -1.56
SSM4P40318 SPO16YHR153C 597 nt5.3□□□□□ -1.56
SSM4P40318 COX19YLL018C-A 297 nt5.3□□□□□ -1.56
SSM4P40318 YLR225CYLR225C 1224 nt5.3□□□□□ -1.56
SSM4P40318 YBR126W-AYBR126W-A 207 nt5.3□□□□□ -1.56
SSM4P40318 AFT1YGL071W 2073 nt5.3□□□□□ -1.56
SSM4P40318 RNY1YPL123C 1305 nt5.3□□□□□ -1.56
SSM4P40318 SRO7YPR032W 3102 nt5.3□□□□□ -1.56
SSM4P40318 YPR022CYPR022C 3402 nt5.29□□□□□ -1.56
SSM4P40318 CDC45YLR103C 1953 nt5.29□□□□□ -1.56
SSM4P40318 YDL241WYDL241W 372 nt5.29□□□□□ -1.56
SSM4P40318 NDJ1YOL104C 1059 nt5.29□□□□□ -1.56
SSM4P40318 APC1YNL172W 5247 nt5.29□□□□□ -1.56
SSM4P40318 VID28YIL017C 2766 nt5.29□□□□□ -1.56
SSM4P40318 MOT2YER068W 1764 nt5.29□□□□□ -1.56
SSM4P40318 WTM2YOR229W 1404 nt5.29□□□□□ -1.56
SSM4P40318 YBR139WYBR139W 1527 nt5.29□□□□□ -1.56
SSM4P40318 HOM2YDR158W 1098 nt5.28□□□□□ -1.56
SSM4P40318 COS4YFL062W 1140 nt5.28□□□□□ -1.56
SSM4P40318 COS3YML132W 1140 nt5.28□□□□□ -1.56
SSM4P40318 YOL024WYOL024W 519 nt5.28□□□□□ -1.56
SSM4P40318 COS2YBR302C 1140 nt5.28□□□□□ -1.56
SSM4P40318 HOT1YMR172W 2160 nt5.28□□□□□ -1.56
SSM4P40318 ARO9YHR137W 1542 nt5.28□□□□□ -1.56
SSM4P40318 TGL1YKL140W 1647 nt5.28□□□□□ -1.56
SSM4P40318 GGA1YDR358W 1674 nt5.27□□□□□ -1.57
SSM4P40318 YGR161W-CYGR161W-C 279 nt5.27□□□□□ -1.57
SSM4P40318 CDC8YJR057W 651 nt5.27□□□□□ -1.57
SSM4P40318 YBL077WYBL077W 432 nt5.27□□□□□ -1.57
SSM4P40318 PFA4YOL003C 1137 nt5.27□□□□□ -1.57
SSM4P40318 MET16YPR167C 786 nt5.27□□□□□ -1.57
SSM4P40318 BSD2YBR290W 966 nt5.27□□□□□ -1.57
SSM4P40318 SAP155YFR040W 3009 nt5.27□□□□□ -1.57
SSM4P40318 SKG6YHR149C 2205 nt5.27□□□□□ -1.57
SSM4P40318 YPK3YBR028C 1578 nt5.27□□□□□ -1.57
SSM4P40318 SFI1YLL003W 2841 nt5.26□□□□□ -1.57
SSM4P40318 RMD5YDR255C 1266 nt5.26□□□□□ -1.57
SSM4P40318 NSE3YDR288W 912 nt5.26□□□□□ -1.57
SSM4P40318 YER076CYER076C 909 nt5.26□□□□□ -1.57
SSM4P40318 HIS6YIL020C 786 nt5.26□□□□□ -1.57
SSM4P40318 YLR049CYLR049C 1287 nt5.26□□□□□ -1.57
SSM4P40318 YLR154W-BYLR154W-B 165 nt5.26□□□□□ -1.57
SSM4P40318 RIB4YOL143C 510 nt5.26□□□□□ -1.57
SSM4P40318 GLO4YOR040W 858 nt5.26□□□□□ -1.57
SSM4P40318 PRP19YLL036C 1512 nt5.26□□□□□ -1.57
SSM4P40318 CUS1YMR240C 1311 nt5.26□□□□□ -1.57
SSM4P40318 ABD1YBR236C 1311 nt5.26□□□□□ -1.57
SSM4P40318 COS7YDL248W 1152 nt5.25□□□□□ -1.57
SSM4P40318 RCR2YDR003W 633 nt5.25□□□□□ -1.57
SSM4P40318 YGL108CYGL108C 423 nt5.25□□□□□ -1.57
SSM4P40318 MTC3YGL226W 372 nt5.25□□□□□ -1.57
SSM4P40318 YGR015CYGR015C 987 nt5.25□□□□□ -1.57
SSM4P40318 REC104YHR157W 549 nt5.25□□□□□ -1.57
SSM4P40318 COS5YJR161C 1152 nt5.25□□□□□ -1.57
SSM4P40318 YMR082CYMR082C 357 nt5.25□□□□□ -1.57
SSM4P40318 CUS2YNL286W 858 nt5.25□□□□□ -1.57
SSM4P40318 YPL077CYPL077C 723 nt5.25□□□□□ -1.57
SSM4P40318 ECM8YBR076W 1065 nt5.25□□□□□ -1.57
SSM4P40318 GPI13YLL031C 3054 nt5.25□□□□□ -1.57
SSM4P40318 MLH2YLR035C 2088 nt5.25□□□□□ -1.57
SSM4P40318 APL6YGR261C 2430 nt5.25□□□□□ -1.57
SSM4P40318 NHX1YDR456W 1902 nt5.25□□□□□ -1.57
SSM4P40318 APE2YKL157W 2859 nt5.24□□□□□ -1.57
SSM4P40318 MRH4YGL064C 1686 nt5.24□□□□□ -1.57
SSM4P40318 TRX3YCR083W 384 nt5.24□□□□□ -1.57
SSM4P40318 PHO92YDR374C 921 nt5.24□□□□□ -1.57
SSM4P40318 FOL2YGR267C 732 nt5.24□□□□□ -1.57
SSM4P40318 SNL1YIL016W 480 nt5.24□□□□□ -1.57
SSM4P40318 EMG1YLR186W 759 nt5.24□□□□□ -1.57
SSM4P40318 UTP23YOR004W 765 nt5.24□□□□□ -1.57
SSM4P40318 FAS2YPL231W 5664 nt5.24□□□□□ -1.57
SSM4P40318 RGP1YDR137W 1992 nt5.24□□□□□ -1.57
SSM4P40318 TGS1YPL157W 948 nt5.23□□□□□ -1.57
SSM4P40318 KRS1YDR037W 1776 nt5.23□□□□□ -1.57
SSM4P40318 HMG1YML075C 3165 nt5.23□□□□□ -1.57
SSM4P40318 CHD1YER164W 4407 nt5.23□□□□□ -1.57
SSM4P40318 RRN6YBL014C 2685 nt5.23□□□□□ -1.57
SSM4P40318 SPT10YJL127C 1923 nt5.23□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 89.2 ms