Protein–RNA interactions for Protein: A0A0A6YYG9

ARPC4-TTLL3, Protein ARPC4-TTLL3, humanhuman

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-TTLL3A0A0A6YYG9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 SRD5A1P1-201ENST00000442297 786 ntBASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 C1orf229-201ENST00000623686 2258 ntBASIC19.71■□□□□ 0.75
ARPC4-TTLL3A0A0A6YYG9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 C17orf82-201ENST00000623772 1530 ntBASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.67■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 AC092171.4-201ENST00000609130 632 ntBASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ARPC4-TTLL3A0A0A6YYG9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms