Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 ABCB10P4-201ENST00000566803 2184 ntBASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHGA8Q9Y5G5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA8Q9Y5G5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHGA8Q9Y5G5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.64■■□□□ 1.05
PCDHGA8Q9Y5G5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.63■■□□□ 1.05
PCDHGA8Q9Y5G5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 YBX1P1-201ENST00000445822 960 ntBASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 RARRES2P11-201ENST00000635158 484 ntBASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PCDHGA8Q9Y5G5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 HLA-L-211ENST00000482052 1765 ntBASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHGA8Q9Y5G5 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 AC090192.1-201ENST00000517740 490 ntBASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 AC126544.1-201ENST00000580842 1059 ntBASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHGA8Q9Y5G5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 AC022517.1-201ENST00000592429 346 ntBASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 AL161729.1-201ENST00000604104 1402 ntBASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHGA8Q9Y5G5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PCDHGA8Q9Y5G5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHGA8Q9Y5G5 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHGA8Q9Y5G5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms