Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNRNP40Q96DI7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 AC144652.1-201ENST00000609974 1624 ntBASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.05■□□□□ 0.8
SNRNP40Q96DI7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 TPRG1LP1-201ENST00000598702 760 ntBASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SNRNP40Q96DI7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 AC026185.1-201ENST00000445748 174 ntBASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 AP004607.4-201ENST00000530158 1459 ntBASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.03■□□□□ 0.8
SNRNP40Q96DI7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SNRNP40Q96DI7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNRNP40Q96DI7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SNRNP40Q96DI7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.02■□□□□ 0.79
SNRNP40Q96DI7 AP003733.4-201ENST00000623785 1697 ntBASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 BID-214ENST00000617586 542 ntTSL 5 BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 AC004854.2-201ENST00000608450 1441 ntBASIC20.01■□□□□ 0.79
SNRNP40Q96DI7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20■□□□□ 0.79
SNRNP40Q96DI7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20■□□□□ 0.79
SNRNP40Q96DI7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20■□□□□ 0.79
SNRNP40Q96DI7 AC104771.1-201ENST00000603335 964 ntBASIC20■□□□□ 0.79
SNRNP40Q96DI7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SNRNP40Q96DI7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 AC022211.4-201ENST00000625094 2161 ntBASIC20■□□□□ 0.79
SNRNP40Q96DI7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNRNP40Q96DI7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.99■□□□□ 0.79
SNRNP40Q96DI7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms