Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.58■■□□□ 1.37
LIMS2Q7Z4I7 AC105265.2-201ENST00000467189 838 ntBASIC23.58■■□□□ 1.37
LIMS2Q7Z4I7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
LIMS2Q7Z4I7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
LIMS2Q7Z4I7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
LIMS2Q7Z4I7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
LIMS2Q7Z4I7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 AP005435.1-201ENST00000529293 1178 ntBASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 AL031602.1-201ENST00000633169 911 ntBASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
LIMS2Q7Z4I7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
LIMS2Q7Z4I7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
LIMS2Q7Z4I7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
LIMS2Q7Z4I7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
LIMS2Q7Z4I7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 IGHV3-19-201ENST00000521488 291 ntBASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 AC126544.1-201ENST00000580842 1059 ntBASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.51■■□□□ 1.35
LIMS2Q7Z4I7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LIMS2Q7Z4I7 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LIMS2Q7Z4I7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms