Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LYSMD4Q5XG99 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LYSMD4Q5XG99 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LYSMD4Q5XG99 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 AC026185.1-201ENST00000445748 174 ntBASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 BID-214ENST00000617586 542 ntTSL 5 BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 AC022211.4-201ENST00000625094 2161 ntBASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LYSMD4Q5XG99 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LYSMD4Q5XG99 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 AP004607.4-201ENST00000530158 1459 ntBASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 AC004854.2-201ENST00000608450 1441 ntBASIC21.93■■□□□ 1.1
LYSMD4Q5XG99 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LYSMD4Q5XG99 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 AC006970.2-201ENST00000450065 779 ntBASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD4Q5XG99 BX005040.4-201ENST00000637145 1518 ntBASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 KRT19P1-201ENST00000405746 1186 ntBASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 AC104771.1-201ENST00000603335 964 ntBASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD4Q5XG99 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD4Q5XG99 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.89■■□□□ 1.09
LYSMD4Q5XG99 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms