Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TFF1P04155 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.6■□□□□ 0.57
TFF1P04155 AC004687.1-201ENST00000579003 1625 ntBASIC18.6■□□□□ 0.57
TFF1P04155 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.59■□□□□ 0.57
TFF1P04155 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.59■□□□□ 0.57
TFF1P04155 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TFF1P04155 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TFF1P04155 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TFF1P04155 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TFF1P04155 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.59■□□□□ 0.57
TFF1P04155 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.59■□□□□ 0.57
TFF1P04155 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TFF1P04155 DUX4L4-201ENST00000566884 1269 ntBASIC18.59■□□□□ 0.57
TFF1P04155 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.59■□□□□ 0.57
TFF1P04155 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.59■□□□□ 0.57
TFF1P04155 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TFF1P04155 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TFF1P04155 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TFF1P04155 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.59■□□□□ 0.57
TFF1P04155 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.59■□□□□ 0.57
TFF1P04155 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TFF1P04155 AC008406.3-201ENST00000620001 1374 ntBASIC18.58■□□□□ 0.57
TFF1P04155 FP325331.1-202ENST00000623531 1380 ntBASIC18.58■□□□□ 0.57
TFF1P04155 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TFF1P04155 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
TFF1P04155 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TFF1P04155 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.58■□□□□ 0.56
TFF1P04155 pRNA.6-201ENST00000610482 90 ntBASIC18.58■□□□□ 0.56
TFF1P04155 pRNA.5-201ENST00000612139 90 ntBASIC18.58■□□□□ 0.56
TFF1P04155 pRNA.11-201ENST00000618423 90 ntBASIC18.58■□□□□ 0.56
TFF1P04155 pRNA.13-201ENST00000619112 90 ntBASIC18.58■□□□□ 0.56
TFF1P04155 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.58■□□□□ 0.56
TFF1P04155 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TFF1P04155 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
TFF1P04155 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.58■□□□□ 0.56
TFF1P04155 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.57■□□□□ 0.56
TFF1P04155 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TFF1P04155 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.56■□□□□ 0.56
TFF1P04155 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.56■□□□□ 0.56
TFF1P04155 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TFF1P04155 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.56■□□□□ 0.56
TFF1P04155 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.56■□□□□ 0.56
TFF1P04155 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TFF1P04155 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
TFF1P04155 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TFF1P04155 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TFF1P04155 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TFF1P04155 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.55■□□□□ 0.56
TFF1P04155 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.55■□□□□ 0.56
TFF1P04155 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TFF1P04155 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TFF1P04155 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.55■□□□□ 0.56
TFF1P04155 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.55■□□□□ 0.56
TFF1P04155 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.55■□□□□ 0.56
TFF1P04155 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TFF1P04155 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TFF1P04155 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TFF1P04155 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TFF1P04155 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
TFF1P04155 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.54■□□□□ 0.56
TFF1P04155 MIR3181-201ENST00000578512 73 ntBASIC18.54■□□□□ 0.56
TFF1P04155 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TFF1P04155 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TFF1P04155 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TFF1P04155 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TFF1P04155 SERBP1P1-201ENST00000396021 1160 ntBASIC18.53■□□□□ 0.56
TFF1P04155 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
TFF1P04155 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms