Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.74■■□□□ 1.07
ITM2AO43736 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
ITM2AO43736 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
ITM2AO43736 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
ITM2AO43736 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
ITM2AO43736 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
ITM2AO43736 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ITM2AO43736 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.73■■□□□ 1.07
ITM2AO43736 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.73■■□□□ 1.07
ITM2AO43736 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ITM2AO43736 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ITM2AO43736 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ITM2AO43736 AC144652.1-201ENST00000609974 1624 ntBASIC21.73■■□□□ 1.07
ITM2AO43736 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
ITM2AO43736 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ITM2AO43736 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ITM2AO43736 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.72■■□□□ 1.07
ITM2AO43736 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
ITM2AO43736 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ITM2AO43736 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.72■■□□□ 1.07
ITM2AO43736 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.71■■□□□ 1.07
ITM2AO43736 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ITM2AO43736 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.71■■□□□ 1.07
ITM2AO43736 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
ITM2AO43736 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ITM2AO43736 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
ITM2AO43736 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.7■■□□□ 1.07
ITM2AO43736 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ITM2AO43736 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ITM2AO43736 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
ITM2AO43736 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
ITM2AO43736 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
ITM2AO43736 BHLHE23-202ENST00000612929 1109 ntBASIC21.7■■□□□ 1.06
ITM2AO43736 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ITM2AO43736 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ITM2AO43736 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ITM2AO43736 AC026310.3-201ENST00000625186 2373 ntBASIC21.69■■□□□ 1.06
ITM2AO43736 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ITM2AO43736 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
ITM2AO43736 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.69■■□□□ 1.06
ITM2AO43736 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ITM2AO43736 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ITM2AO43736 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ITM2AO43736 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
ITM2AO43736 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.68■■□□□ 1.06
ITM2AO43736 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.68■■□□□ 1.06
ITM2AO43736 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.68■■□□□ 1.06
ITM2AO43736 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.68■■□□□ 1.06
ITM2AO43736 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.68■■□□□ 1.06
ITM2AO43736 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ITM2AO43736 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.67■■□□□ 1.06
ITM2AO43736 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ITM2AO43736 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.67■■□□□ 1.06
ITM2AO43736 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ITM2AO43736 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.67■■□□□ 1.06
ITM2AO43736 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ITM2AO43736 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ITM2AO43736 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ITM2AO43736 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITM2AO43736 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.66■■□□□ 1.06
ITM2AO43736 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITM2AO43736 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ITM2AO43736 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms