Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 SRD5A1P1-201ENST00000442297 786 ntBASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 AC133561.1-201ENST00000568600 2415 ntBASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGC3Q9UN70 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 AC099791.2-201ENST00000605725 427 ntBASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGC3Q9UN70 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 C1orf229-201ENST00000623686 2258 ntBASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGC3Q9UN70 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 AC006455.2-201ENST00000429931 906 ntBASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGC3Q9UN70 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDHGC3Q9UN70 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGC3Q9UN70 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 AC092171.4-201ENST00000609130 632 ntBASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGC3Q9UN70 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 AC131212.1-201ENST00000613771 668 ntBASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGC3Q9UN70 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms