Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 AC144652.1-201ENST00000609974 1624 ntBASIC20.89■□□□□ 0.94
SIMC1Q8NDZ2 C17orf82-201ENST00000623772 1530 ntBASIC20.89■□□□□ 0.94
SIMC1Q8NDZ2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SIMC1Q8NDZ2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.89■□□□□ 0.94
SIMC1Q8NDZ2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.89■□□□□ 0.93
SIMC1Q8NDZ2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.89■□□□□ 0.93
SIMC1Q8NDZ2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
SIMC1Q8NDZ2 AL356740.2-201ENST00000601559 647 ntBASIC20.89■□□□□ 0.93
SIMC1Q8NDZ2 AL512631.2-201ENST00000604634 923 ntBASIC20.89■□□□□ 0.93
SIMC1Q8NDZ2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SIMC1Q8NDZ2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 MIR4466-201ENST00000606121 54 ntBASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
SIMC1Q8NDZ2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.86■□□□□ 0.93
SIMC1Q8NDZ2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SIMC1Q8NDZ2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 AC131281.2-201ENST00000520478 145 ntBASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.84■□□□□ 0.93
SIMC1Q8NDZ2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SIMC1Q8NDZ2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.83■□□□□ 0.92
SIMC1Q8NDZ2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.82■□□□□ 0.92
SIMC1Q8NDZ2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SIMC1Q8NDZ2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms