Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 IL4I1-206ENST00000596022 747 ntTSL 218.57■□□□□ 0.565e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.475e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-213ENST00000541597 685 ntTSL 317.6■□□□□ 0.415e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-215ENST00000542389 618 ntTSL 417.6■□□□□ 0.415e-6■□□□□ 8.9
EIF3DO15371 MON2-205ENST00000547095 5708 ntTSL 1 (best)17.56■□□□□ 0.45e-6■□□□□ 8.9
EIF3DO15371 NUP62-206ENST00000595463 563 ntTSL 417.38■□□□□ 0.375e-6■□□□□ 8.9
EIF3DO15371 NUP62-204ENST00000594673 564 ntTSL 517.34■□□□□ 0.375e-6■□□□□ 8.9
EIF3DO15371 SNX17-204ENST00000453453 1638 ntTSL 1 (best)17.33■□□□□ 0.375e-6■□□□□ 8.9
EIF3DO15371 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.3■□□□□ 0.361e-13■□□□□ 8.9
EIF3DO15371 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.19■□□□□ 0.345e-6■□□□□ 8.9
EIF3DO15371 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.93■□□□□ 0.35e-6■□□□□ 8.9
EIF3DO15371 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.35e-6■□□□□ 8.9
EIF3DO15371 CHRD-205ENST00000448472 3547 ntTSL 1 (best)16.9■□□□□ 0.35e-6■□□□□ 8.9
EIF3DO15371 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.35e-6■□□□□ 8.9
EIF3DO15371 ATP6V1H-218ENST00000524164 1734 ntTSL 516.87■□□□□ 0.295e-6■□□□□ 8.9
EIF3DO15371 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.285e-6■□□□□ 8.9
EIF3DO15371 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.8■□□□□ 0.285e-6■□□□□ 8.9
EIF3DO15371 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.76■□□□□ 0.275e-6■□□□□ 8.9
EIF3DO15371 COL4A5-203ENST00000470339 782 ntTSL 316.73■□□□□ 0.275e-6■□□□□ 8.9
EIF3DO15371 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.262e-9■□□□□ 8.9
EIF3DO15371 PLEKHB1-219ENST00000544532 556 ntTSL 416.22■□□□□ 0.195e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-214ENST00000541760 562 ntTSL 216.09■□□□□ 0.175e-6■□□□□ 8.9
EIF3DO15371 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.155e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-207ENST00000535582 567 ntTSL 515.94■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-209ENST00000538227 577 ntTSL 215.94■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-210ENST00000539157 586 ntTSL 515.94■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-221ENST00000545798 534 ntTSL 415.94■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-222ENST00000546251 562 ntTSL 515.94■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 NUP62-219ENST00000599830 588 ntTSL 415.93■□□□□ 0.145e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.135e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-212ENST00000540431 579 ntTSL 515.72■□□□□ 0.115e-6■□□□□ 8.9
EIF3DO15371 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.67■□□□□ 0.12e-9■□□□□ 8.9
EIF3DO15371 DYNC1H1-208ENST00000556139 763 ntTSL 315.55■□□□□ 0.085e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-215ENST00000601645 832 ntTSL 315.47■□□□□ 0.075e-6■□□□□ 8.9
EIF3DO15371 DEK-204ENST00000505224 1372 ntTSL 215.4■□□□□ 0.061e-13■□□□□ 8.9
EIF3DO15371 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.4■□□□□ 0.065e-6■□□□□ 8.9
EIF3DO15371 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.052e-9■□□□□ 8.9
EIF3DO15371 CHRD-204ENST00000420973 3492 ntTSL 1 (best)15.32■□□□□ 0.045e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-217ENST00000543524 656 ntTSL 415.29■□□□□ 0.045e-6■□□□□ 8.9
EIF3DO15371 CHRD-212ENST00000470150 4234 ntTSL 215.16■□□□□ 0.025e-6■□□□□ 8.9
EIF3DO15371 CHRD-209ENST00000461120 683 ntTSL 1 (best)15.12■□□□□ 0.015e-6■□□□□ 8.9
EIF3DO15371 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -01e-13■□□□□ 8.9
EIF3DO15371 MCM3AP-204ENST00000467026 2671 ntTSL 1 (best)14.69□□□□□ -0.065e-6■□□□□ 8.9
EIF3DO15371 DEK-203ENST00000503715 580 ntTSL 514.4□□□□□ -0.11e-13■□□□□ 8.9
EIF3DO15371 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.115e-6■□□□□ 8.9
EIF3DO15371 XPO1-206ENST00000428210 6776 ntTSL 214.24□□□□□ -0.132e-9■□□□□ 8.9
EIF3DO15371 HDLBP-210ENST00000423693 544 ntTSL 514.18□□□□□ -0.145e-6■□□□□ 8.9
EIF3DO15371 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.94□□□□□ -0.182e-9■□□□□ 8.9
EIF3DO15371 EEF1D-214ENST00000526135 535 ntTSL 213.94□□□□□ -0.185e-6■□□□□ 8.9
EIF3DO15371 CPSF1-204ENST00000529288 588 ntTSL 213.91□□□□□ -0.185e-6■□□□□ 8.9
EIF3DO15371 NUP62-214ENST00000598301 565 ntTSL 413.71□□□□□ -0.215e-6■□□□□ 8.9
EIF3DO15371 NUP62-215ENST00000599186 466 ntTSL 513.71□□□□□ -0.215e-6■□□□□ 8.9
EIF3DO15371 ATP6V1H-209ENST00000521335 1672 ntTSL 213.69□□□□□ -0.225e-6■□□□□ 8.9
EIF3DO15371 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC13.48□□□□□ -0.255e-6■□□□□ 8.9
EIF3DO15371 IL4I1-205ENST00000596011 714 ntTSL 213.42□□□□□ -0.265e-6■□□□□ 8.9
EIF3DO15371 NUP62-201ENST00000352066 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.285e-6■□□□□ 8.9
EIF3DO15371 IL4I1-207ENST00000597295 651 ntTSL 313.25□□□□□ -0.295e-6■□□□□ 8.9
EIF3DO15371 HDLBP-246ENST00000496569 374 ntTSL 413.18□□□□□ -0.35e-6■□□□□ 8.9
EIF3DO15371 SNX17-205ENST00000464279 549 ntTSL 213.17□□□□□ -0.35e-6■□□□□ 8.9
EIF3DO15371 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.335e-6■□□□□ 8.9
EIF3DO15371 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.335e-6■□□□□ 8.9
EIF3DO15371 MON2-212ENST00000552115 3760 ntTSL 5 BASIC12.94□□□□□ -0.345e-6■□□□□ 8.9
EIF3DO15371 NUP62-223ENST00000601665 531 ntTSL 512.83□□□□□ -0.365e-6■□□□□ 8.9
EIF3DO15371 PLEKHB1-208ENST00000536527 433 ntTSL 512.7□□□□□ -0.385e-6■□□□□ 8.9
EIF3DO15371 NUP62-209ENST00000596437 894 ntTSL 412.69□□□□□ -0.385e-6■□□□□ 8.9
EIF3DO15371 NUP62-220ENST00000600583 782 ntTSL 412.58□□□□□ -0.45e-6■□□□□ 8.9
EIF3DO15371 NUP62-216ENST00000599560 562 ntTSL 212.52□□□□□ -0.415e-6■□□□□ 8.9
EIF3DO15371 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.445e-6■□□□□ 8.9
EIF3DO15371 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.445e-6■□□□□ 8.9
EIF3DO15371 MCM3AP-207ENST00000486937 4593 ntTSL 211.7□□□□□ -0.545e-6■□□□□ 8.9
EIF3DO15371 NUP62-222ENST00000600935 587 ntTSL 411.53□□□□□ -0.565e-6■□□□□ 8.9
EIF3DO15371 HDLBP-207ENST00000420451 559 ntTSL 411.4□□□□□ -0.585e-6■□□□□ 8.9
EIF3DO15371 HDLBP-206ENST00000417540 525 ntTSL 411.07□□□□□ -0.645e-6■□□□□ 8.9
EIF3DO15371 HDLBP-216ENST00000428482 1096 ntTSL 511.07□□□□□ -0.645e-6■□□□□ 8.9
EIF3DO15371 NUP62-218ENST00000599788 564 ntTSL 411.05□□□□□ -0.645e-6■□□□□ 8.9
EIF3DO15371 AC011452.1-201ENST00000451973 575 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.655e-6■□□□□ 8.9
EIF3DO15371 HDLBP-205ENST00000413241 581 ntTSL 510.96□□□□□ -0.655e-6■□□□□ 8.9
EIF3DO15371 HDLBP-230ENST00000462130 464 ntTSL 410.78□□□□□ -0.685e-6■□□□□ 8.9
EIF3DO15371 MON2-214ENST00000641654 10382 ntBASIC10.76□□□□□ -0.695e-6■□□□□ 8.9
EIF3DO15371 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.695e-6■□□□□ 8.9
EIF3DO15371 HDLBP-211ENST00000425989 530 ntTSL 510.65□□□□□ -0.75e-6■□□□□ 8.9
EIF3DO15371 NUP62-202ENST00000422090 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.725e-6■□□□□ 8.9
EIF3DO15371 MCM3AP-210ENST00000496607 4075 ntTSL 210.46□□□□□ -0.745e-6■□□□□ 8.9
EIF3DO15371 NUP62-203ENST00000593652 905 ntTSL 210.33□□□□□ -0.765e-6■□□□□ 8.9
EIF3DO15371 COL4A5-204ENST00000477429 564 ntTSL 1 (best)10.24□□□□□ -0.775e-6■□□□□ 8.9
EIF3DO15371 HNRNPM-210ENST00000598367 298 ntTSL 510□□□□□ -0.815e-6■□□□□ 8.9
EIF3DO15371 SNX17-207ENST00000489402 743 ntTSL 29.99□□□□□ -0.815e-6■□□□□ 8.9
EIF3DO15371 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.845e-6■□□□□ 8.9
EIF3DO15371 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.92e-9■□□□□ 8.9
EIF3DO15371 NUP62-217ENST00000599567 579 ntTSL 49.38□□□□□ -0.915e-6■□□□□ 8.9
EIF3DO15371 SPP1-204ENST00000504310 557 ntTSL 39.15□□□□□ -0.945e-6■□□□□ 8.9
EIF3DO15371 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.115e-6■□□□□ 8.9
EIF3DO15371 VPS13C-206ENST00000558338 1863 ntTSL 27.99□□□□□ -1.135e-6■□□□□ 8.9
EIF3DO15371 NUP62-213ENST00000597814 510 ntTSL 47.98□□□□□ -1.135e-6■□□□□ 8.9
EIF3DO15371 NUP62-210ENST00000596680 473 ntTSL 26.71□□□□□ -1.345e-6■□□□□ 8.9
EIF3DO15371 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.485e-6■□□□□ 8.9
EIF3DO15371 EP300-211ENST00000635691 402 ntTSL 34.97□□□□□ -1.615e-6■□□□□ 8.9
EIF3DO15371 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.625e-6■□□□□ 8.9
EIF3DO15371 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.635e-6■□□□□ 8.9
EIF3DO15371 ATP5H-203ENST00000538432 533 ntTSL 34.34□□□□□ -1.715e-6■□□□□ 8.9
Retrieved 100 of 4,069 protein–RNA pairs in 1041.9 ms