RNA–Protein interactions for RNA: ENST00000601645.5

HNRNPM-215, Transcript of heterogeneous nuclear ribonucleoprotein M, humanhuman

TSL 3

Gene HNRNPM, Length 832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPM-215ENST00000601645 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
HNRNPM-215ENST00000601645 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
HNRNPM-215ENST00000601645 CCDC180Q9P1Z9 1646 aa27.38■■□□□ 1.97
HNRNPM-215ENST00000601645 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
HNRNPM-215ENST00000601645 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
HNRNPM-215ENST00000601645 DCAF8L2P0C7V8 631 aa26.25■■□□□ 1.79
HNRNPM-215ENST00000601645 ABCC9O60706 1549 aa26.04■■□□□ 1.76
HNRNPM-215ENST00000601645 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
HNRNPM-215ENST00000601645 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
HNRNPM-215ENST00000601645 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
HNRNPM-215ENST00000601645 NACADO15069 1562 aa25.62■■□□□ 1.69
HNRNPM-215ENST00000601645 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
HNRNPM-215ENST00000601645 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
HNRNPM-215ENST00000601645 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
HNRNPM-215ENST00000601645 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
HNRNPM-215ENST00000601645 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
HNRNPM-215ENST00000601645 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
HNRNPM-215ENST00000601645 CECR2Q9BXF3 1484 aa24.42■■□□□ 1.5
HNRNPM-215ENST00000601645 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
HNRNPM-215ENST00000601645 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
HNRNPM-215ENST00000601645 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
HNRNPM-215ENST00000601645 SMARCA4P51532 1647 aa24.14■■□□□ 1.46
HNRNPM-215ENST00000601645 WIZO95785 1651 aa24.03■■□□□ 1.44
HNRNPM-215ENST00000601645 EIF4G1Q04637 1599 aaKnown RBP23.84■■□□□ 1.41
HNRNPM-215ENST00000601645 PEG3Q9GZU2 1588 aa23.84■■□□□ 1.41
HNRNPM-215ENST00000601645 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
HNRNPM-215ENST00000601645 SMARCA2P51531 1590 aa23.83■■□□□ 1.41
HNRNPM-215ENST00000601645 ATAD2BQ9ULI0 1458 aa23.83■■□□□ 1.41
HNRNPM-215ENST00000601645 BAZ1BQ9UIG0 1483 aaKnown RBP23.72■■□□□ 1.39
HNRNPM-215ENST00000601645 NCAPD3P42695 1498 aa23.67■■□□□ 1.38
HNRNPM-215ENST00000601645 CCDC88BA6NC98 1476 aa23.64■■□□□ 1.38
HNRNPM-215ENST00000601645 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
HNRNPM-215ENST00000601645 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
HNRNPM-215ENST00000601645 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
HNRNPM-215ENST00000601645 CC2D2AQ9P2K1 1620 aa23.49■■□□□ 1.35
HNRNPM-215ENST00000601645 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
HNRNPM-215ENST00000601645 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
HNRNPM-215ENST00000601645 CFTRP13569 1480 aa23.1■■□□□ 1.29
HNRNPM-215ENST00000601645 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
HNRNPM-215ENST00000601645 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
HNRNPM-215ENST00000601645 DNAJC5BQ9UF47 199 aa23.01■■□□□ 1.27
HNRNPM-215ENST00000601645 FAM9AQ8IZU1 332 aaPredicted RBP22.91■■□□□ 1.26
HNRNPM-215ENST00000601645 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
HNRNPM-215ENST00000601645 PRDM2Q13029 1718 aa22.81■■□□□ 1.24
HNRNPM-215ENST00000601645 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
HNRNPM-215ENST00000601645 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
HNRNPM-215ENST00000601645 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
HNRNPM-215ENST00000601645 PDS5BQ9NTI5 1447 aa22.78■■□□□ 1.24
HNRNPM-215ENST00000601645 NESP48681 1621 aa22.78■■□□□ 1.24
HNRNPM-215ENST00000601645 TOP2BQ02880 1626 aa22.75■■□□□ 1.23
HNRNPM-215ENST00000601645 EEA1Q15075 1411 aa22.74■■□□□ 1.23
HNRNPM-215ENST00000601645 CUX1P39880 1505 aa22.7■■□□□ 1.22
HNRNPM-215ENST00000601645 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
HNRNPM-215ENST00000601645 SOGA1O94964 1423 aa22.68■■□□□ 1.22
HNRNPM-215ENST00000601645 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
HNRNPM-215ENST00000601645 CEP164Q9UPV0 1460 aa22.66■■□□□ 1.22
HNRNPM-215ENST00000601645 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
HNRNPM-215ENST00000601645 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
HNRNPM-215ENST00000601645 DNMBPQ6XZF7 1577 aa22.54■■□□□ 1.2
HNRNPM-215ENST00000601645 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
HNRNPM-215ENST00000601645 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
HNRNPM-215ENST00000601645 FGD5Q6ZNL6 1462 aa22.49■■□□□ 1.19
HNRNPM-215ENST00000601645 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
HNRNPM-215ENST00000601645 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
HNRNPM-215ENST00000601645 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
HNRNPM-215ENST00000601645 CUX2O14529 1486 aa22.4■■□□□ 1.18
HNRNPM-215ENST00000601645 ERCC6Q03468 1493 aa22.4■■□□□ 1.18
HNRNPM-215ENST00000601645 MRC2Q9UBG0 1479 aa22.4■■□□□ 1.18
HNRNPM-215ENST00000601645 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
HNRNPM-215ENST00000601645 GOLGA3Q08378 1498 aa22.37■■□□□ 1.17
HNRNPM-215ENST00000601645 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
HNRNPM-215ENST00000601645 TNIKQ9UKE5 1360 aa22.33■■□□□ 1.17
HNRNPM-215ENST00000601645 ABCA10Q8WWZ4 1543 aa22.31■■□□□ 1.16
HNRNPM-215ENST00000601645 KIF21BO75037 1637 aa22.29■■□□□ 1.16
HNRNPM-215ENST00000601645 IGF1RP08069 1367 aa22.28■■□□□ 1.16
HNRNPM-215ENST00000601645 PRXQ9BXM0 1461 aa22.24■■□□□ 1.15
HNRNPM-215ENST00000601645 WDR62O43379 1518 aa22.21■■□□□ 1.15
HNRNPM-215ENST00000601645 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
HNRNPM-215ENST00000601645 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
HNRNPM-215ENST00000601645 ERICH3Q5RHP9 1530 aa22.19■■□□□ 1.14
HNRNPM-215ENST00000601645 TDRD9Q8NDG6 1382 aaKnown RBP22.18■■□□□ 1.14
HNRNPM-215ENST00000601645 IFT140Q96RY7 1462 aa22.15■■□□□ 1.14
HNRNPM-215ENST00000601645 CEP162Q5TB80 1403 aa22.14■■□□□ 1.13
HNRNPM-215ENST00000601645 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
HNRNPM-215ENST00000601645 TARBP1Q13395 1621 aaKnown RBP22.09■■□□□ 1.13
HNRNPM-215ENST00000601645 FOXD1Q16676 465 aa22.08■■□□□ 1.13
HNRNPM-215ENST00000601645 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
HNRNPM-215ENST00000601645 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
HNRNPM-215ENST00000601645 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
HNRNPM-215ENST00000601645 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
HNRNPM-215ENST00000601645 CLIP1P30622 1438 aa22.02■■□□□ 1.12
HNRNPM-215ENST00000601645 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.123e-8■■■□□ 16.8
HNRNPM-215ENST00000601645 CUL7Q14999 1698 aa22.01■■□□□ 1.11
HNRNPM-215ENST00000601645 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
HNRNPM-215ENST00000601645 ZNF608Q9ULD9 1512 aaPredicted RBP21.93■■□□□ 1.1
HNRNPM-215ENST00000601645 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
HNRNPM-215ENST00000601645 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
HNRNPM-215ENST00000601645 APLP2Q06481 763 aa21.83■■□□□ 1.09
HNRNPM-215ENST00000601645 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
HNRNPM-215ENST00000601645 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms