Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.64■□□□□ 0.58
TRBV23-1A0A0A0MS06 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRBV23-1A0A0A0MS06 AC009102.2-201ENST00000606772 1639 ntBASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.63■□□□□ 0.57
TRBV23-1A0A0A0MS06 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRBV23-1A0A0A0MS06 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRBV23-1A0A0A0MS06 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 AL512631.2-201ENST00000604634 923 ntBASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRBV23-1A0A0A0MS06 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 C17orf82-201ENST00000623772 1530 ntBASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 SRD5A1P1-201ENST00000442297 786 ntBASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 AC131281.2-201ENST00000520478 145 ntBASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRBV23-1A0A0A0MS06 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.58■□□□□ 0.57
TRBV23-1A0A0A0MS06 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.58■□□□□ 0.57
TRBV23-1A0A0A0MS06 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRBV23-1A0A0A0MS06 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
TRBV23-1A0A0A0MS06 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRBV23-1A0A0A0MS06 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRBV23-1A0A0A0MS06 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms