Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRGV1A0A0A0MS02 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRGV1A0A0A0MS02 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.08■□□□□ 0.16
TRGV1A0A0A0MS02 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 KRT16P3-201ENST00000439127 1283 ntBASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRGV1A0A0A0MS02 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 AL353803.4-201ENST00000565882 1934 ntBASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 AC012676.1-201ENST00000574705 1949 ntBASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 UNC93B8-201ENST00000511903 705 ntBASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.06■□□□□ 0.16
TRGV1A0A0A0MS02 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 AC144652.1-201ENST00000609974 1624 ntBASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.05■□□□□ 0.16
TRGV1A0A0A0MS02 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 MIR6724-1-201ENST00000616420 92 ntBASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 MIR6724-2-201ENST00000616483 92 ntBASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 MIR6724-4-201ENST00000617390 92 ntBASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 MIR6724-3-201ENST00000622482 92 ntBASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRGV1A0A0A0MS02 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRGV1A0A0A0MS02 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms