Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 AC099791.2-201ENST00000605725 427 ntBASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
DTX4Q9Y2E6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 LINC01529-204ENST00000636474 1715 ntBASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DTX4Q9Y2E6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 AC008406.3-201ENST00000620001 1374 ntBASIC20.72■□□□□ 0.91
DTX4Q9Y2E6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 FP325331.1-202ENST00000623531 1380 ntBASIC20.71■□□□□ 0.91
DTX4Q9Y2E6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 DUX4L4-201ENST00000566884 1269 ntBASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DTX4Q9Y2E6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 AC009086.3-201ENST00000623486 1008 ntBASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.69■□□□□ 0.9
DTX4Q9Y2E6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 AC241377.3-202ENST00000626088 1088 ntBASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 AC241585.3-202ENST00000628937 1088 ntBASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 AC245100.8-202ENST00000629247 1058 ntBASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.68■□□□□ 0.9
DTX4Q9Y2E6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.67■□□□□ 0.9
DTX4Q9Y2E6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
DTX4Q9Y2E6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DTX4Q9Y2E6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms