Protein–RNA interactions for Protein: Q9NPI7

KRCC1, Lysine-rich coiled-coil protein 1, humanhuman

Predicted RBP Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1Q9NPI7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KRCC1Q9NPI7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 LINC00526-201ENST00000581067 1875 ntBASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KRCC1Q9NPI7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 AC010980.1-201ENST00000587192 1142 ntBASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRCC1Q9NPI7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.39■□□□□ 0.86
KRCC1Q9NPI7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
KRCC1Q9NPI7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
KRCC1Q9NPI7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 AC242852.2-201ENST00000615738 1807 ntBASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
KRCC1Q9NPI7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 MIR4508-201ENST00000584178 70 ntBASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 AL353803.4-201ENST00000565882 1934 ntBASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.37■□□□□ 0.85
KRCC1Q9NPI7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 PVT1_1.1-201ENST00000615125 194 ntBASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 EP400NL-214ENST00000641289 2402 ntBASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
KRCC1Q9NPI7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.35■□□□□ 0.85
KRCC1Q9NPI7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms