Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX6-2Q9C056 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
NKX6-2Q9C056 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
NKX6-2Q9C056 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
NKX6-2Q9C056 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NKX6-2Q9C056 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX6-2Q9C056 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18■□□□□ 0.47
NKX6-2Q9C056 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18■□□□□ 0.47
NKX6-2Q9C056 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 LINC01521-201ENST00000504184 1943 ntBASIC17.99■□□□□ 0.47
NKX6-2Q9C056 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
NKX6-2Q9C056 LSR-205ENST00000427250 1606 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-2Q9C056 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-2Q9C056 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 AC126177.7-201ENST00000547904 679 ntBASIC17.96■□□□□ 0.47
NKX6-2Q9C056 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NKX6-2Q9C056 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NKX6-2Q9C056 AC092053.2-201ENST00000640557 1818 ntBASIC17.95■□□□□ 0.46
NKX6-2Q9C056 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-2Q9C056 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-2Q9C056 ESRRAP2-201ENST00000418437 1549 ntBASIC17.94■□□□□ 0.46
NKX6-2Q9C056 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms