Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM56Q96MV1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 AC139530.1-201ENST00000575312 1977 ntBASIC18.34■□□□□ 0.53
TMEM56Q96MV1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 AC092053.2-201ENST00000640557 1818 ntBASIC18.34■□□□□ 0.53
TMEM56Q96MV1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM56Q96MV1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM56Q96MV1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM56Q96MV1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM56Q96MV1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TMEM56Q96MV1 C11orf96-202ENST00000528572 1834 ntBASIC18.33■□□□□ 0.52
TMEM56Q96MV1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 LONRF2P2-201ENST00000439212 571 ntBASIC18.32■□□□□ 0.52
TMEM56Q96MV1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 HSD17B1P1-201ENST00000590052 955 ntBASIC18.32■□□□□ 0.52
TMEM56Q96MV1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TMEM56Q96MV1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 U85056.1-201ENST00000616429 682 ntBASIC18.31■□□□□ 0.52
TMEM56Q96MV1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM56Q96MV1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 PKD1P6-201ENST00000343738 4769 ntBASIC18.3■□□□□ 0.52
TMEM56Q96MV1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 AC129492.7-201ENST00000622992 756 ntBASIC18.3■□□□□ 0.52
TMEM56Q96MV1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM56Q96MV1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM56Q96MV1 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM56Q96MV1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM56Q96MV1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM56Q96MV1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM56Q96MV1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.28■□□□□ 0.52
TMEM56Q96MV1 AC022616.5-201ENST00000518796 181 ntBASIC18.28■□□□□ 0.52
TMEM56Q96MV1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms