Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 AL117332.1-201ENST00000622628 974 ntBASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIMC1Q8NDZ2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SIMC1Q8NDZ2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 AC131212.1-201ENST00000613771 668 ntBASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
SIMC1Q8NDZ2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIMC1Q8NDZ2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 DUSP8P3-201ENST00000399571 1760 ntBASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIMC1Q8NDZ2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 MIR3621-201ENST00000580529 85 ntBASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SIMC1Q8NDZ2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 AL353803.4-201ENST00000565882 1934 ntBASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
SIMC1Q8NDZ2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 AL024507.2-201ENST00000606070 2574 ntBASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIMC1Q8NDZ2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SIMC1Q8NDZ2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.9■□□□□ 0.94
SIMC1Q8NDZ2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms