Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.62■□□□□ 0.41
FAM78BQ5VT40 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 AL592293.1-201ENST00000502889 1188 ntBASIC17.61■□□□□ 0.41
FAM78BQ5VT40 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FAM78BQ5VT40 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 AL592295.1-201ENST00000400984 884 ntBASIC17.6■□□□□ 0.41
FAM78BQ5VT40 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FAM78BQ5VT40 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 RPS2P7-201ENST00000447334 885 ntBASIC17.59■□□□□ 0.41
FAM78BQ5VT40 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FAM78BQ5VT40 AC242852.2-201ENST00000615738 1807 ntBASIC17.58■□□□□ 0.41
FAM78BQ5VT40 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
FAM78BQ5VT40 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.58■□□□□ 0.41
FAM78BQ5VT40 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
FAM78BQ5VT40 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 AC018755.3-202ENST00000596210 929 ntBASIC17.58■□□□□ 0.4
FAM78BQ5VT40 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
FAM78BQ5VT40 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 U85056.1-201ENST00000616429 682 ntBASIC17.57■□□□□ 0.4
FAM78BQ5VT40 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 ESRRAP2-201ENST00000418437 1549 ntBASIC17.57■□□□□ 0.4
FAM78BQ5VT40 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
FAM78BQ5VT40 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.56■□□□□ 0.4
FAM78BQ5VT40 ALDH1A3-203ENST00000557963 1670 ntBASIC17.55■□□□□ 0.4
FAM78BQ5VT40 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
FAM78BQ5VT40 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms