Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CDH6P55285 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.2■■□□□ 1.3
CDH6P55285 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH6P55285 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CDH6P55285 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 MIR6724-1-201ENST00000616420 92 ntBASIC23.19■■□□□ 1.3
CDH6P55285 MIR6724-2-201ENST00000616483 92 ntBASIC23.19■■□□□ 1.3
CDH6P55285 MIR6724-4-201ENST00000617390 92 ntBASIC23.19■■□□□ 1.3
CDH6P55285 MIR6724-3-201ENST00000622482 92 ntBASIC23.19■■□□□ 1.3
CDH6P55285 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CDH6P55285 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.19■■□□□ 1.3
CDH6P55285 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDH6P55285 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CDH6P55285 AC009102.2-201ENST00000606772 1639 ntBASIC23.19■■□□□ 1.3
CDH6P55285 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CDH6P55285 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH6P55285 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDH6P55285 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CDH6P55285 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CDH6P55285 KRT16P3-201ENST00000439127 1283 ntBASIC23.18■■□□□ 1.3
CDH6P55285 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH6P55285 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.17■■□□□ 1.3
CDH6P55285 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.17■■□□□ 1.3
CDH6P55285 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.17■■□□□ 1.3
CDH6P55285 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.17■■□□□ 1.3
CDH6P55285 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
CDH6P55285 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDH6P55285 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CDH6P55285 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CDH6P55285 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
CDH6P55285 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CDH6P55285 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.16■■□□□ 1.3
CDH6P55285 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.16■■□□□ 1.3
CDH6P55285 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.16■■□□□ 1.3
CDH6P55285 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.16■■□□□ 1.3
CDH6P55285 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.16■■□□□ 1.3
CDH6P55285 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDH6P55285 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CDH6P55285 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.15■■□□□ 1.3
CDH6P55285 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.15■■□□□ 1.3
CDH6P55285 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDH6P55285 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.15■■□□□ 1.3
CDH6P55285 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDH6P55285 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.15■■□□□ 1.3
CDH6P55285 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CDH6P55285 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.15■■□□□ 1.3
CDH6P55285 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.15■■□□□ 1.3
CDH6P55285 LINC01529-204ENST00000636474 1715 ntBASIC23.15■■□□□ 1.3
CDH6P55285 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.15■■□□□ 1.3
CDH6P55285 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.15■■□□□ 1.3
CDH6P55285 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.14■■□□□ 1.3
CDH6P55285 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH6P55285 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH6P55285 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.14■■□□□ 1.29
CDH6P55285 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH6P55285 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH6P55285 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDH6P55285 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.14■■□□□ 1.29
CDH6P55285 FP325331.1-202ENST00000623531 1380 ntBASIC23.14■■□□□ 1.29
CDH6P55285 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH6P55285 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH6P55285 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDH6P55285 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.13■■□□□ 1.29
CDH6P55285 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.13■■□□□ 1.29
CDH6P55285 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.13■■□□□ 1.29
CDH6P55285 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDH6P55285 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.13■■□□□ 1.29
CDH6P55285 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
CDH6P55285 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.12■■□□□ 1.29
CDH6P55285 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.12■■□□□ 1.29
CDH6P55285 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
CDH6P55285 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDH6P55285 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.12■■□□□ 1.29
CDH6P55285 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH6P55285 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH6P55285 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.11■■□□□ 1.29
CDH6P55285 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CDH6P55285 AC233723.2-201ENST00000623798 2106 ntBASIC23.11■■□□□ 1.29
CDH6P55285 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH6P55285 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH6P55285 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDH6P55285 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.11■■□□□ 1.29
CDH6P55285 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms