Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TFF1P04155 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.76■□□□□ 0.59
TFF1P04155 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TFF1P04155 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TFF1P04155 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.75■□□□□ 0.59
TFF1P04155 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TFF1P04155 AL512631.2-201ENST00000604634 923 ntBASIC18.75■□□□□ 0.59
TFF1P04155 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TFF1P04155 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.75■□□□□ 0.59
TFF1P04155 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TFF1P04155 AC068473.5-201ENST00000616428 2072 ntBASIC18.74■□□□□ 0.59
TFF1P04155 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.74■□□□□ 0.59
TFF1P04155 MIR4466-201ENST00000606121 54 ntBASIC18.74■□□□□ 0.59
TFF1P04155 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.74■□□□□ 0.59
TFF1P04155 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 AC144652.1-201ENST00000609974 1624 ntBASIC18.74■□□□□ 0.59
TFF1P04155 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.74■□□□□ 0.59
TFF1P04155 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TFF1P04155 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.73■□□□□ 0.59
TFF1P04155 AC131281.2-201ENST00000520478 145 ntBASIC18.73■□□□□ 0.59
TFF1P04155 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.73■□□□□ 0.59
TFF1P04155 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 C17orf82-201ENST00000623772 1530 ntBASIC18.73■□□□□ 0.59
TFF1P04155 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.73■□□□□ 0.59
TFF1P04155 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
TFF1P04155 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TFF1P04155 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
TFF1P04155 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TFF1P04155 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.72■□□□□ 0.59
TFF1P04155 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.72■□□□□ 0.59
TFF1P04155 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.72■□□□□ 0.59
TFF1P04155 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.72■□□□□ 0.59
TFF1P04155 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.72■□□□□ 0.59
TFF1P04155 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TFF1P04155 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.72■□□□□ 0.59
TFF1P04155 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TFF1P04155 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TFF1P04155 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TFF1P04155 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TFF1P04155 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.71■□□□□ 0.59
TFF1P04155 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.71■□□□□ 0.59
TFF1P04155 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.71■□□□□ 0.59
TFF1P04155 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TFF1P04155 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TFF1P04155 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TFF1P04155 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.7■□□□□ 0.58
TFF1P04155 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 AC006455.2-201ENST00000429931 906 ntBASIC18.7■□□□□ 0.58
TFF1P04155 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.7■□□□□ 0.58
TFF1P04155 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TFF1P04155 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 C1orf229-201ENST00000623686 2258 ntBASIC18.7■□□□□ 0.58
TFF1P04155 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TFF1P04155 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TFF1P04155 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TFF1P04155 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.69■□□□□ 0.58
TFF1P04155 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TFF1P04155 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TFF1P04155 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
TFF1P04155 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TFF1P04155 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.69■□□□□ 0.58
TFF1P04155 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.69■□□□□ 0.58
TFF1P04155 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.69■□□□□ 0.58
TFF1P04155 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.69■□□□□ 0.58
TFF1P04155 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.68■□□□□ 0.58
TFF1P04155 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TFF1P04155 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFF1P04155 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFF1P04155 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TFF1P04155 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TFF1P04155 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms