Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDHGC3Q9UN70 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGC3Q9UN70 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.72■■□□□ 1.39
PCDHGC3Q9UN70 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PCDHGC3Q9UN70 LINC01529-204ENST00000636474 1715 ntBASIC23.72■■□□□ 1.39
PCDHGC3Q9UN70 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDHGC3Q9UN70 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 DUX4L4-201ENST00000566884 1269 ntBASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCDHGC3Q9UN70 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.7■■□□□ 1.39
PCDHGC3Q9UN70 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGC3Q9UN70 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
PCDHGC3Q9UN70 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDHGC3Q9UN70 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 AC068473.5-201ENST00000616428 2072 ntBASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDHGC3Q9UN70 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDHGC3Q9UN70 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 C9orf163-202ENST00000624034 2573 ntBASIC23.67■■□□□ 1.38
PCDHGC3Q9UN70 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 AL512631.2-201ENST00000604634 923 ntBASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
PCDHGC3Q9UN70 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHGC3Q9UN70 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHGC3Q9UN70 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHGC3Q9UN70 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDHGC3Q9UN70 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHGC3Q9UN70 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGC3Q9UN70 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHGC3Q9UN70 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PCDHGC3Q9UN70 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms