Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 BBC1YJL020C 3474 nt3.54□□□□□ -1.84
SHH3Q04487 RIM4YHL024W 2142 nt3.53□□□□□ -1.84
SHH3Q04487 RSC3YDR303C 2658 nt3.53□□□□□ -1.84
SHH3Q04487 FAS2YPL231W 5664 nt3.53□□□□□ -1.84
SHH3Q04487 NVJ1YHR195W 966 nt3.53□□□□□ -1.84
SHH3Q04487 YIL165CYIL165C 360 nt3.53□□□□□ -1.84
SHH3Q04487 LOH1YJL038C 660 nt3.53□□□□□ -1.84
SHH3Q04487 YLR125WYLR125W 411 nt3.53□□□□□ -1.84
SHH3Q04487 ROT1YMR200W 771 nt3.53□□□□□ -1.84
SHH3Q04487 YOR292CYOR292C 930 nt3.53□□□□□ -1.84
SHH3Q04487 FEX1YOR390W 1128 nt3.53□□□□□ -1.84
SHH3Q04487 ELC1YPL046C 300 nt3.53□□□□□ -1.84
SHH3Q04487 FEX2YPL279C 1128 nt3.53□□□□□ -1.84
SHH3Q04487 TIF5YPR041W 1218 nt3.53□□□□□ -1.84
SHH3Q04487 YPR174CYPR174C 666 nt3.53□□□□□ -1.84
SHH3Q04487 PBN1YCL052C 1251 nt3.53□□□□□ -1.84
SHH3Q04487 YND1YER005W 1893 nt3.53□□□□□ -1.84
SHH3Q04487 FAR10YLR238W 1437 nt3.53□□□□□ -1.85
SHH3Q04487 KCC4YCL024W 3114 nt3.53□□□□□ -1.85
SHH3Q04487 GPI10YGL142C 1851 nt3.52□□□□□ -1.85
SHH3Q04487 YER145C-AYER145C-A 438 nt3.52□□□□□ -1.85
SHH3Q04487 BNS1YGR230W 414 nt3.52□□□□□ -1.85
SHH3Q04487 NTR2YKR022C 969 nt3.52□□□□□ -1.85
SHH3Q04487 GTR1YML121W 933 nt3.52□□□□□ -1.85
SHH3Q04487 YDC1YPL087W 954 nt3.52□□□□□ -1.85
SHH3Q04487 snR3snR3 194 nt3.52□□□□□ -1.85
SHH3Q04487 OM14YBR230C 405 nt3.52□□□□□ -1.85
SHH3Q04487 PRP40YKL012W 1752 nt3.51□□□□□ -1.85
SHH3Q04487 EMP47YFL048C 1338 nt3.51□□□□□ -1.85
SHH3Q04487 KIP3YGL216W 2418 nt3.51□□□□□ -1.85
SHH3Q04487 HIS4YCL030C 2400 nt3.51□□□□□ -1.85
SHH3Q04487 NOP58YOR310C 1536 nt3.51□□□□□ -1.85
SHH3Q04487 THI13YDL244W 1023 nt3.51□□□□□ -1.85
SHH3Q04487 YHR214WYHR214W 612 nt3.51□□□□□ -1.85
SHH3Q04487 YIL171WYIL171W 330 nt3.51□□□□□ -1.85
SHH3Q04487 THI11YJR156C 1023 nt3.51□□□□□ -1.85
SHH3Q04487 YAR066WYAR066W 612 nt3.51□□□□□ -1.85
SHH3Q04487 TOM40YMR203W 1164 nt3.51□□□□□ -1.85
SHH3Q04487 SRB6YBR253W 366 nt3.51□□□□□ -1.85
SHH3Q04487 YBR139WYBR139W 1527 nt3.5□□□□□ -1.85
SHH3Q04487 SSH1YBR283C 1473 nt3.5□□□□□ -1.85
SHH3Q04487 SOL4YGR248W 768 nt3.5□□□□□ -1.85
SHH3Q04487 YKL169CYKL169C 384 nt3.5□□□□□ -1.85
SHH3Q04487 REX4YOL080C 870 nt3.5□□□□□ -1.85
SHH3Q04487 PWR1PWR1 941 nt3.5□□□□□ -1.85
SHH3Q04487 PRM1YNL279W 1986 nt3.5□□□□□ -1.85
SHH3Q04487 SMP1YBR182C 1359 nt3.5□□□□□ -1.85
SHH3Q04487 YIL001WYIL001W 1542 nt3.49□□□□□ -1.85
SHH3Q04487 IFM1YOL023W 2031 nt3.49□□□□□ -1.85
SHH3Q04487 GIP4YAL031C 2283 nt3.49□□□□□ -1.85
SHH3Q04487 BRE4YDL231C 3378 nt3.49□□□□□ -1.85
SHH3Q04487 ARC1YGL105W 1131 nt3.49□□□□□ -1.85
SHH3Q04487 SRP40YKR092C 1221 nt3.49□□□□□ -1.85
SHH3Q04487 RMI1YPL024W 726 nt3.49□□□□□ -1.85
SHH3Q04487 IML2YJL082W 2196 nt3.49□□□□□ -1.85
SHH3Q04487 BUD8YLR353W 1812 nt3.49□□□□□ -1.85
SHH3Q04487 LDB17YDL146W 1476 nt3.48□□□□□ -1.85
SHH3Q04487 CIN5YOR028C 888 nt3.48□□□□□ -1.85
SHH3Q04487 RAD17YOR368W 1206 nt3.48□□□□□ -1.85
SHH3Q04487 JHD2YJR119C 2187 nt3.48□□□□□ -1.85
SHH3Q04487 KRE5YOR336W 4098 nt3.48□□□□□ -1.85
SHH3Q04487 SNF2YOR290C 5112 nt3.48□□□□□ -1.85
SHH3Q04487 MET12YPL023C 1974 nt3.47□□□□□ -1.85
SHH3Q04487 OCA4YCR095C 1089 nt3.47□□□□□ -1.85
SHH3Q04487 RPL24AYGL031C 468 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)CtQ(UUG)C 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)D1tQ(UUG)D1 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)D2tQ(UUG)D2 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)D3tQ(UUG)D3 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)E1tQ(UUG)E1 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)HtQ(UUG)H 72 nt3.47□□□□□ -1.85
SHH3Q04487 tQ(UUG)LtQ(UUG)L 72 nt3.47□□□□□ -1.85
SHH3Q04487 COX2Q0250 756 nt3.47□□□□□ -1.85
SHH3Q04487 MAD2YJL030W 591 nt3.47□□□□□ -1.85
SHH3Q04487 RPC19YNL113W 429 nt3.47□□□□□ -1.85
SHH3Q04487 YPR071WYPR071W 636 nt3.47□□□□□ -1.85
SHH3Q04487 BCK2YER167W 2556 nt3.47□□□□□ -1.85
SHH3Q04487 RTC1YOL138C 4026 nt3.46□□□□□ -1.86
SHH3Q04487 LAS1YKR063C 1509 nt3.46□□□□□ -1.86
SHH3Q04487 CDC10YCR002C 969 nt3.46□□□□□ -1.86
SHH3Q04487 YDL094CYDL094C 510 nt3.46□□□□□ -1.86
SHH3Q04487 HSP31YDR533C 714 nt3.46□□□□□ -1.86
SHH3Q04487 YJR112W-AYJR112W-A 330 nt3.46□□□□□ -1.86
SHH3Q04487 HEM15YOR176W 1182 nt3.46□□□□□ -1.86
SHH3Q04487 SSO1YPL232W 873 nt3.46□□□□□ -1.86
SHH3Q04487 UBA3YPR066W 900 nt3.46□□□□□ -1.86
SHH3Q04487 BIK1YCL029C 1323 nt3.45□□□□□ -1.86
SHH3Q04487 MCM7YBR202W 2538 nt3.45□□□□□ -1.86
SHH3Q04487 MCM2YBL023C 2607 nt3.45□□□□□ -1.86
SHH3Q04487 ARP10YDR106W 855 nt3.45□□□□□ -1.86
SHH3Q04487 CIA2YHR122W 696 nt3.45□□□□□ -1.86
SHH3Q04487 YHR140WYHR140W 720 nt3.45□□□□□ -1.86
SHH3Q04487 YLR407WYLR407W 687 nt3.45□□□□□ -1.86
SHH3Q04487 YMR086C-AYMR086C-A 339 nt3.45□□□□□ -1.86
SHH3Q04487 SUI1YNL244C 327 nt3.45□□□□□ -1.86
SHH3Q04487 MRPS9YBR146W 837 nt3.45□□□□□ -1.86
SHH3Q04487 ATM1YMR301C 2073 nt3.45□□□□□ -1.86
SHH3Q04487 TDA11YHR159W 1515 nt3.44□□□□□ -1.86
SHH3Q04487 SPR28YDR218C 1272 nt3.44□□□□□ -1.86
SHH3Q04487 YDR274CYDR274C 372 nt3.44□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms