Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 SCC4YER147C 1875 nt17.56■□□□□ 0.4
UFD4P33202 YMR090WYMR090W 684 nt17.56■□□□□ 0.4
UFD4P33202 VPS75YNL246W 795 nt17.56■□□□□ 0.4
UFD4P33202 YBR220CYBR220C 1683 nt17.55■□□□□ 0.4
UFD4P33202 SDH1YKL148C 1923 nt17.55■□□□□ 0.4
UFD4P33202 TRM5YHR070W 1500 nt17.53■□□□□ 0.4
UFD4P33202 CCT4YDL143W 1587 nt17.49■□□□□ 0.39
UFD4P33202 SWC5YBR231C 912 nt17.48■□□□□ 0.39
UFD4P33202 YGL034CYGL034C 366 nt17.47■□□□□ 0.39
UFD4P33202 STB1YNL309W 1263 nt17.46■□□□□ 0.39
UFD4P33202 YDR524C-BYDR524C-B 201 nt17.44■□□□□ 0.38
UFD4P33202 NDI1YML120C 1542 nt17.43■□□□□ 0.38
UFD4P33202 VPS60YDR486C 690 nt17.39■□□□□ 0.37
UFD4P33202 SPC25YER018C 666 nt17.39■□□□□ 0.37
UFD4P33202 ALG3YBL082C 1377 nt17.38■□□□□ 0.37
UFD4P33202 PAU7YAR020C 168 nt17.37■□□□□ 0.37
UFD4P33202 SIM1YIL123W 1431 nt17.37■□□□□ 0.37
UFD4P33202 UBA4YHR111W 1323 nt17.35■□□□□ 0.37
UFD4P33202 GPI16YHR188C 1833 nt17.35■□□□□ 0.37
UFD4P33202 RBG1YAL036C 1110 nt17.35■□□□□ 0.37
UFD4P33202 ATF2YGR177C 1608 nt17.32■□□□□ 0.36
UFD4P33202 SPT8YLR055C 1809 nt17.31■□□□□ 0.36
UFD4P33202 RAD51YER095W 1203 nt17.31■□□□□ 0.36
UFD4P33202 YNL195CYNL195C 786 nt17.31■□□□□ 0.36
UFD4P33202 SHB17YKR043C 816 nt17.3■□□□□ 0.36
UFD4P33202 XYL2YLR070C 1071 nt17.27■□□□□ 0.36
UFD4P33202 RRT12YCR045C 1476 nt17.27■□□□□ 0.35
UFD4P33202 YSR3YKR053C 1215 nt17.25■□□□□ 0.35
UFD4P33202 DDR2YOL052C-A 186 nt17.25■□□□□ 0.35
UFD4P33202 BDF1YLR399C 2061 nt17.22■□□□□ 0.35
UFD4P33202 SAM1YLR180W 1149 nt17.17■□□□□ 0.34
UFD4P33202 RPM1RPM1 483 nt17.14■□□□□ 0.33
UFD4P33202 FEN2YCR028C 1539 nt17.11■□□□□ 0.33
UFD4P33202 TAT1YBR069C 1860 nt17.1■□□□□ 0.33
UFD4P33202 YDL086C-AYDL086C-A 435 nt17.1■□□□□ 0.33
UFD4P33202 TIM17YJL143W 477 nt17.1■□□□□ 0.33
UFD4P33202 YDR010CYDR010C 333 nt17.09■□□□□ 0.33
UFD4P33202 YFL067WYFL067W 528 nt17.08■□□□□ 0.32
UFD4P33202 CRR1YLR213C 1269 nt17.07■□□□□ 0.32
UFD4P33202 ERF2YLR246W 1080 nt17.06■□□□□ 0.32
UFD4P33202 ANP1YEL036C 1503 nt17.06■□□□□ 0.32
UFD4P33202 YHL050CYHL050C 2094 nt17■□□□□ 0.31
UFD4P33202 PHO89YBR296C 1725 nt17■□□□□ 0.31
UFD4P33202 AIM45YPR004C 1035 nt16.99■□□□□ 0.31
UFD4P33202 SGT2YOR007C 1041 nt16.97■□□□□ 0.31
UFD4P33202 SHM2YLR058C 1410 nt16.95■□□□□ 0.3
UFD4P33202 YMR226CYMR226C 804 nt16.95■□□□□ 0.3
UFD4P33202 MIC10YCL057C-A 294 nt16.94■□□□□ 0.3
UFD4P33202 SNG1YGR197C 1644 nt16.94■□□□□ 0.3
UFD4P33202 RET2YFR051C 1641 nt16.92■□□□□ 0.3
UFD4P33202 YIR016WYIR016W 798 nt16.91■□□□□ 0.3
UFD4P33202 YCR087WYCR087W 516 nt16.89■□□□□ 0.29
UFD4P33202 YNR029CYNR029C 1290 nt16.89■□□□□ 0.29
UFD4P33202 YLR111WYLR111W 333 nt16.84■□□□□ 0.29
UFD4P33202 NIT1YIL164C 600 nt16.82■□□□□ 0.28
UFD4P33202 XDJ1YLR090W 1380 nt16.82■□□□□ 0.28
UFD4P33202 HEM12YDR047W 1089 nt16.81■□□□□ 0.28
UFD4P33202 YLR349WYLR349W 507 nt16.77■□□□□ 0.28
UFD4P33202 PCH2YBR186W 1695 nt16.77■□□□□ 0.27
UFD4P33202 COQ2YNR041C 1119 nt16.73■□□□□ 0.27
UFD4P33202 STE4YOR212W 1272 nt16.73■□□□□ 0.27
UFD4P33202 SEC11YIR022W 504 nt16.73■□□□□ 0.27
UFD4P33202 ADH7YCR105W 1086 nt16.72■□□□□ 0.27
UFD4P33202 MRP20YDR405W 792 nt16.68■□□□□ 0.26
UFD4P33202 SDH5YOL071W 489 nt16.67■□□□□ 0.26
UFD4P33202 GUT2YIL155C 1950 nt16.64■□□□□ 0.25
UFD4P33202 CAB5YDR196C 726 nt16.62■□□□□ 0.25
UFD4P33202 YLR279WYLR279W 390 nt16.62■□□□□ 0.25
UFD4P33202 PAU15YIR041W 375 nt16.61■□□□□ 0.25
UFD4P33202 LYS4YDR234W 2082 nt16.59■□□□□ 0.25
UFD4P33202 GDH3YAL062W 1374 nt16.58■□□□□ 0.24
UFD4P33202 SFA1YDL168W 1161 nt16.53■□□□□ 0.24
UFD4P33202 YLR437C-AYLR437C-A 228 nt16.5■□□□□ 0.23
UFD4P33202 YHL019W-AYHL019W-A 594 nt16.48■□□□□ 0.23
UFD4P33202 BNA2YJR078W 1362 nt16.46■□□□□ 0.23
UFD4P33202 RTF1YGL244W 1677 nt16.44■□□□□ 0.22
UFD4P33202 MIC12YBR262C 321 nt16.43■□□□□ 0.22
UFD4P33202 PIB2YGL023C 1908 nt16.43■□□□□ 0.22
UFD4P33202 NCP1YHR042W 2076 nt16.43■□□□□ 0.22
UFD4P33202 RPS14BYJL191W 417 nt16.42■□□□□ 0.22
UFD4P33202 RPL4BYDR012W 1089 nt16.41■□□□□ 0.22
UFD4P33202 RPL4AYBR031W 1089 nt16.41■□□□□ 0.22
UFD4P33202 FUN14YAL008W 597 nt16.39■□□□□ 0.21
UFD4P33202 RAD23YEL037C 1197 nt16.37■□□□□ 0.21
UFD4P33202 AVT6YER119C 1347 nt16.37■□□□□ 0.21
UFD4P33202 YHR056W-AYHR056W-A 435 nt16.35■□□□□ 0.21
UFD4P33202 BOP3YNL042W 1191 nt16.35■□□□□ 0.21
UFD4P33202 GPN2YOR262W 1044 nt16.35■□□□□ 0.21
UFD4P33202 YGR201CYGR201C 678 nt16.34■□□□□ 0.21
UFD4P33202 YJL195CYJL195C 702 nt16.31■□□□□ 0.2
UFD4P33202 YGR012WYGR012W 1182 nt16.29■□□□□ 0.2
UFD4P33202 HHO1YPL127C 777 nt16.27■□□□□ 0.19
UFD4P33202 tS(GCU)LtS(GCU)L 80 nt16.23■□□□□ 0.19
UFD4P33202 SHH4YLR164W 507 nt16.22■□□□□ 0.19
UFD4P33202 CLB6YGR109C 1143 nt16.21■□□□□ 0.19
UFD4P33202 ESS1YJR017C 513 nt16.17■□□□□ 0.18
UFD4P33202 UTH1YKR042W 1098 nt16.17■□□□□ 0.18
UFD4P33202 TSC10YBR265W 963 nt16.17■□□□□ 0.18
UFD4P33202 ADH1YOL086C 1047 nt16.16■□□□□ 0.18
UFD4P33202 YCR102CYCR102C 1107 nt16.16■□□□□ 0.18
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms