Protein–RNA interactions for Protein: Q9Y5E3

PCDHB6, Protocadherin beta-6, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6Q9Y5E3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB6Q9Y5E3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.68■■□□□ 1.7
PCDHB6Q9Y5E3 UNC93B8-201ENST00000511903 705 ntBASIC25.68■■□□□ 1.7
PCDHB6Q9Y5E3 MTDHP2-201ENST00000601468 714 ntBASIC25.68■■□□□ 1.7
PCDHB6Q9Y5E3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB6Q9Y5E3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB6Q9Y5E3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 AC010997.5-201ENST00000609182 354 ntBASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB6Q9Y5E3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB6Q9Y5E3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHB6Q9Y5E3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB6Q9Y5E3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.63■■□□□ 1.69
PCDHB6Q9Y5E3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHB6Q9Y5E3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
PCDHB6Q9Y5E3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHB6Q9Y5E3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.61■■□□□ 1.69
PCDHB6Q9Y5E3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHB6Q9Y5E3 GUSBP5-201ENST00000418136 578 ntBASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 AL353803.4-201ENST00000565882 1934 ntBASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDHB6Q9Y5E3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHB6Q9Y5E3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.58■■□□□ 1.68
PCDHB6Q9Y5E3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHB6Q9Y5E3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB6Q9Y5E3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDHB6Q9Y5E3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHB6Q9Y5E3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC25.57■■□□□ 1.68
PCDHB6Q9Y5E3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms