Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 AC003957.1-201ENST00000625108 2673 ntBASIC20.76■□□□□ 0.91
CHCHD3Q9NX63 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 AC127496.7-201ENST00000625110 1798 ntBASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHCHD3Q9NX63 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.74■□□□□ 0.91
CHCHD3Q9NX63 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHCHD3Q9NX63 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHCHD3Q9NX63 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHCHD3Q9NX63 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.7■□□□□ 0.91
CHCHD3Q9NX63 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 RPS2P35-201ENST00000443417 897 ntBASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHCHD3Q9NX63 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHCHD3Q9NX63 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 AC025884.2-201ENST00000553429 711 ntBASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHCHD3Q9NX63 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms