Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SDF2Q99470 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.84■□□□□ 0.93
SDF2Q99470 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDF2Q99470 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDF2Q99470 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
SDF2Q99470 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.83■□□□□ 0.93
SDF2Q99470 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDF2Q99470 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.83■□□□□ 0.93
SDF2Q99470 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.83■□□□□ 0.93
SDF2Q99470 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.92
SDF2Q99470 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDF2Q99470 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SDF2Q99470 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.82■□□□□ 0.92
SDF2Q99470 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.82■□□□□ 0.92
SDF2Q99470 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.82■□□□□ 0.92
SDF2Q99470 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDF2Q99470 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.82■□□□□ 0.92
SDF2Q99470 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.81■□□□□ 0.92
SDF2Q99470 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.81■□□□□ 0.92
SDF2Q99470 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 MTDHP2-201ENST00000601468 714 ntBASIC20.81■□□□□ 0.92
SDF2Q99470 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SDF2Q99470 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.81■□□□□ 0.92
SDF2Q99470 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDF2Q99470 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDF2Q99470 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.8■□□□□ 0.92
SDF2Q99470 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDF2Q99470 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDF2Q99470 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
SDF2Q99470 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDF2Q99470 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.79■□□□□ 0.92
SDF2Q99470 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SDF2Q99470 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDF2Q99470 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SDF2Q99470 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SDF2Q99470 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.78■□□□□ 0.92
SDF2Q99470 AC010997.5-201ENST00000609182 354 ntBASIC20.78■□□□□ 0.92
SDF2Q99470 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SDF2Q99470 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDF2Q99470 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 TSPY9P-201ENST00000440215 945 ntBASIC20.77■□□□□ 0.92
SDF2Q99470 TSPY11P-201ENST00000442607 1045 ntBASIC20.77■□□□□ 0.92
SDF2Q99470 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.77■□□□□ 0.92
SDF2Q99470 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDF2Q99470 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SDF2Q99470 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDF2Q99470 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
SDF2Q99470 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.76■□□□□ 0.91
SDF2Q99470 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDF2Q99470 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.76■□□□□ 0.91
SDF2Q99470 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.76■□□□□ 0.91
SDF2Q99470 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDF2Q99470 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.76■□□□□ 0.91
SDF2Q99470 AL353803.4-201ENST00000565882 1934 ntBASIC20.76■□□□□ 0.91
SDF2Q99470 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDF2Q99470 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDF2Q99470 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.76■□□□□ 0.91
SDF2Q99470 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SDF2Q99470 AC144652.1-201ENST00000609974 1624 ntBASIC20.75■□□□□ 0.91
SDF2Q99470 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDF2Q99470 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
SDF2Q99470 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SDF2Q99470 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.75■□□□□ 0.91
SDF2Q99470 AL035685.1-201ENST00000636663 812 ntBASIC20.75■□□□□ 0.91
SDF2Q99470 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDF2Q99470 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SDF2Q99470 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms