Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SNAI3Q3KNW1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SNAI3Q3KNW1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 AC012676.1-201ENST00000574705 1949 ntBASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.51■□□□□ 0.71
SNAI3Q3KNW1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 AC005703.6-201ENST00000623265 1329 ntBASIC19.5■□□□□ 0.71
SNAI3Q3KNW1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 TSPY9P-201ENST00000440215 945 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 TSPY11P-201ENST00000442607 1045 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 MTDHP2-201ENST00000601468 714 ntBASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.49■□□□□ 0.71
SNAI3Q3KNW1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.48■□□□□ 0.71
SNAI3Q3KNW1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.47■□□□□ 0.71
SNAI3Q3KNW1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SNAI3Q3KNW1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNAI3Q3KNW1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms