Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.41■■□□□ 1.02
PHC1P78364 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PHC1P78364 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.41■■□□□ 1.02
PHC1P78364 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.41■■□□□ 1.02
PHC1P78364 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHC1P78364 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.41■■□□□ 1.02
PHC1P78364 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PHC1P78364 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PHC1P78364 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PHC1P78364 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PHC1P78364 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PHC1P78364 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PHC1P78364 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PHC1P78364 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PHC1P78364 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
PHC1P78364 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
PHC1P78364 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.4■■□□□ 1.02
PHC1P78364 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PHC1P78364 AC079630.1-202ENST00000618127 1840 ntBASIC21.4■■□□□ 1.02
PHC1P78364 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PHC1P78364 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PHC1P78364 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PHC1P78364 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.39■■□□□ 1.01
PHC1P78364 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.39■■□□□ 1.01
PHC1P78364 AC004448.1-201ENST00000458332 883 ntBASIC21.39■■□□□ 1.01
PHC1P78364 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.39■■□□□ 1.01
PHC1P78364 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.39■■□□□ 1.01
PHC1P78364 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
PHC1P78364 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PHC1P78364 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.39■■□□□ 1.01
PHC1P78364 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.38■■□□□ 1.01
PHC1P78364 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.38■■□□□ 1.01
PHC1P78364 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PHC1P78364 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.37■■□□□ 1.01
PHC1P78364 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
PHC1P78364 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.37■■□□□ 1.01
PHC1P78364 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.37■■□□□ 1.01
PHC1P78364 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.37■■□□□ 1.01
PHC1P78364 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PHC1P78364 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.37■■□□□ 1.01
PHC1P78364 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PHC1P78364 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PHC1P78364 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PHC1P78364 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.36■■□□□ 1.01
PHC1P78364 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.36■■□□□ 1.01
PHC1P78364 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PHC1P78364 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PHC1P78364 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PHC1P78364 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PHC1P78364 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PHC1P78364 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.36■■□□□ 1.01
PHC1P78364 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PHC1P78364 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PHC1P78364 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.35■■□□□ 1.01
PHC1P78364 AC103834.1-201ENST00000520383 144 ntBASIC21.35■■□□□ 1.01
PHC1P78364 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.35■■□□□ 1.01
PHC1P78364 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.35■■□□□ 1.01
PHC1P78364 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PHC1P78364 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PHC1P78364 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.35■■□□□ 1.01
PHC1P78364 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PHC1P78364 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.34■■□□□ 1.01
PHC1P78364 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHC1P78364 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PHC1P78364 MIR4508-201ENST00000584178 70 ntBASIC21.34■■□□□ 1.01
PHC1P78364 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PHC1P78364 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
PHC1P78364 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.33■■□□□ 1.01
PHC1P78364 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.33■■□□□ 1.01
PHC1P78364 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHC1P78364 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHC1P78364 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.33■■□□□ 1.01
PHC1P78364 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PHC1P78364 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.33■■□□□ 1.01
PHC1P78364 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PHC1P78364 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.33■■□□□ 1
PHC1P78364 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PHC1P78364 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.32■■□□□ 1
PHC1P78364 GUSBP5-202ENST00000510805 1989 ntBASIC21.32■■□□□ 1
PHC1P78364 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
PHC1P78364 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.32■■□□□ 1
PHC1P78364 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.32■■□□□ 1
PHC1P78364 AL033527.3-201ENST00000566366 1196 ntBASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms