Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 FOL2YGR267C 732 nt5.93□□□□□ -1.46
TY1B-PR3P0C2J1 YMR130WYMR130W 909 nt5.93□□□□□ -1.46
TY1B-PR3P0C2J1 GDE1YPL110C 3672 nt5.93□□□□□ -1.46
TY1B-PR3P0C2J1 CLF1YLR117C 2064 nt5.93□□□□□ -1.46
TY1B-PR3P0C2J1 ALT2YDR111C 1524 nt5.93□□□□□ -1.46
TY1B-PR3P0C2J1 BIK1YCL029C 1323 nt5.92□□□□□ -1.46
TY1B-PR3P0C2J1 MET3YJR010W 1536 nt5.92□□□□□ -1.46
TY1B-PR3P0C2J1 TDA8YAL064C-A 381 nt5.91□□□□□ -1.46
TY1B-PR3P0C2J1 YLR296WYLR296W 327 nt5.91□□□□□ -1.46
TY1B-PR3P0C2J1 ERG7YHR072W 2196 nt5.91□□□□□ -1.46
TY1B-PR3P0C2J1 AAP1YHR047C 2571 nt5.91□□□□□ -1.46
TY1B-PR3P0C2J1 YGR018CYGR018C 330 nt5.9□□□□□ -1.46
TY1B-PR3P0C2J1 AAD10YJR155W 867 nt5.9□□□□□ -1.46
TY1B-PR3P0C2J1 YML131WYML131W 1098 nt5.9□□□□□ -1.46
TY1B-PR3P0C2J1 PPG1YNR032W 1107 nt5.9□□□□□ -1.46
TY1B-PR3P0C2J1 DAL81YIR023W 2913 nt5.9□□□□□ -1.46
TY1B-PR3P0C2J1 YDR271CYDR271C 372 nt5.9□□□□□ -1.47
TY1B-PR3P0C2J1 BNA1YJR025C 534 nt5.9□□□□□ -1.47
TY1B-PR3P0C2J1 ISA1YLL027W 753 nt5.9□□□□□ -1.47
TY1B-PR3P0C2J1 YOR008W-BYOR008W-B 102 nt5.9□□□□□ -1.47
TY1B-PR3P0C2J1 GAS3YMR215W 1575 nt5.89□□□□□ -1.47
TY1B-PR3P0C2J1 Q0182Q0182 405 nt5.89□□□□□ -1.47
TY1B-PR3P0C2J1 MRPL7YDR237W 879 nt5.88□□□□□ -1.47
TY1B-PR3P0C2J1 SKG6YHR149C 2205 nt5.88□□□□□ -1.47
TY1B-PR3P0C2J1 YLR049CYLR049C 1287 nt5.87□□□□□ -1.47
TY1B-PR3P0C2J1 MRT4YKL009W 711 nt5.86□□□□□ -1.47
TY1B-PR3P0C2J1 PEX30YLR324W 1572 nt5.86□□□□□ -1.47
TY1B-PR3P0C2J1 HST1YOL068C 1512 nt5.86□□□□□ -1.47
TY1B-PR3P0C2J1 COX19YLL018C-A 297 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 URA4YLR420W 1095 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 NRK1YNL129W 723 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 POF1YCL047C 777 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 HXT7YDR342C 1713 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 HXT6YDR343C 1713 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 FUN30YAL019W 3396 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 UBP7YIL156W 3216 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 JIP5YPR169W 1479 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 AIR1YIL079C 1083 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 MRP21YBL090W 534 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 MRP51YPL118W 1035 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 PBN1YCL052C 1251 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 CTT1YGR088W 1689 nt5.85□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)CtK(CUU)C 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)D1tK(CUU)D1 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)D2tK(CUU)D2 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)E1tK(CUU)E1 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)E2tK(CUU)E2 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)FtK(CUU)F 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)G1tK(CUU)G1 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)G2tK(CUU)G2 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)G3tK(CUU)G3 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)ItK(CUU)I 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)JtK(CUU)J 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)KtK(CUU)K 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)MtK(CUU)M 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 tK(CUU)PtK(CUU)P 73 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 JLP1YLL057C 1239 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 PRD1YCL057W 2139 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 NOG1YPL093W 1944 nt5.84□□□□□ -1.47
TY1B-PR3P0C2J1 YNR061CYNR061C 660 nt5.83□□□□□ -1.48
TY1B-PR3P0C2J1 RMD1YDL001W 1293 nt5.83□□□□□ -1.48
TY1B-PR3P0C2J1 PLP2YOR281C 861 nt5.83□□□□□ -1.48
TY1B-PR3P0C2J1 CMK1YFR014C 1341 nt5.82□□□□□ -1.48
TY1B-PR3P0C2J1 NUP1YOR098C 3231 nt5.82□□□□□ -1.48
TY1B-PR3P0C2J1 GPP1YIL053W 753 nt5.82□□□□□ -1.48
TY1B-PR3P0C2J1 YIM1YMR152W 1098 nt5.82□□□□□ -1.48
TY1B-PR3P0C2J1 ARC40YBR234C 1155 nt5.82□□□□□ -1.48
TY1B-PR3P0C2J1 ADE6YGR061C 4077 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 TRM8YDL201W 861 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 UBP9YER098W 2265 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 LCB2YDR062W 1686 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 ALG9YNL219C 1668 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 AIM3YBR108W 2844 nt5.81□□□□□ -1.48
TY1B-PR3P0C2J1 CHK1YBR274W 1584 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 TFC7YOR110W 1308 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 RAD2YGR258C 3096 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 TSL1YML100W 3297 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 YDL121CYDL121C 450 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 YDR250CYDR250C 276 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 OAR1YKL055C 837 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 POP4YBR257W 840 nt5.8□□□□□ -1.48
TY1B-PR3P0C2J1 YDR056CYDR056C 618 nt5.79□□□□□ -1.48
TY1B-PR3P0C2J1 CDC15YAR019C 2925 nt5.79□□□□□ -1.48
TY1B-PR3P0C2J1 COQ5YML110C 924 nt5.78□□□□□ -1.48
TY1B-PR3P0C2J1 EMP47YFL048C 1338 nt5.78□□□□□ -1.48
TY1B-PR3P0C2J1 SOL4YGR248W 768 nt5.78□□□□□ -1.48
TY1B-PR3P0C2J1 CAT5YOR125C 702 nt5.78□□□□□ -1.48
TY1B-PR3P0C2J1 MSB2YGR014W 3921 nt5.78□□□□□ -1.48
TY1B-PR3P0C2J1 TGL4YKR089C 2733 nt5.77□□□□□ -1.49
TY1B-PR3P0C2J1 FRE3YOR381W 2136 nt5.77□□□□□ -1.49
TY1B-PR3P0C2J1 STE23YLR389C 3084 nt5.76□□□□□ -1.49
TY1B-PR3P0C2J1 AGE2YIL044C 897 nt5.76□□□□□ -1.49
TY1B-PR3P0C2J1 YBL036CYBL036C 774 nt5.76□□□□□ -1.49
TY1B-PR3P0C2J1 LCB5YLR260W 2064 nt5.76□□□□□ -1.49
TY1B-PR3P0C2J1 YEL074WYEL074W 339 nt5.75□□□□□ -1.49
TY1B-PR3P0C2J1 RMR1YGL250W 726 nt5.75□□□□□ -1.49
TY1B-PR3P0C2J1 SFK1YKL051W 1062 nt5.75□□□□□ -1.49
TY1B-PR3P0C2J1 YBR056W-AYBR056W-A 201 nt5.75□□□□□ -1.49
TY1B-PR3P0C2J1 VID22YLR373C 2706 nt5.75□□□□□ -1.49
TY1B-PR3P0C2J1 ROG3YFR022W 2202 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 64.4 ms